Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.27■□□□□ 0.2
SIMC1Q8NDZ2 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.27■□□□□ 0.2
SIMC1Q8NDZ2 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
SIMC1Q8NDZ2 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SIMC1Q8NDZ2 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
SIMC1Q8NDZ2 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SIMC1Q8NDZ2 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.27■□□□□ 0.19
SIMC1Q8NDZ2 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.27■□□□□ 0.19
SIMC1Q8NDZ2 AC011676.5-201ENST00000624864 2660 ntBASIC16.27■□□□□ 0.19
SIMC1Q8NDZ2 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
SIMC1Q8NDZ2 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
SIMC1Q8NDZ2 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
SIMC1Q8NDZ2 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SIMC1Q8NDZ2 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.27■□□□□ 0.19
SIMC1Q8NDZ2 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
SIMC1Q8NDZ2 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SIMC1Q8NDZ2 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SIMC1Q8NDZ2 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SIMC1Q8NDZ2 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.27■□□□□ 0.19
SIMC1Q8NDZ2 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
SIMC1Q8NDZ2 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SIMC1Q8NDZ2 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SIMC1Q8NDZ2 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SIMC1Q8NDZ2 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SIMC1Q8NDZ2 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SIMC1Q8NDZ2 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SIMC1Q8NDZ2 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SIMC1Q8NDZ2 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.26■□□□□ 0.19
SIMC1Q8NDZ2 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SIMC1Q8NDZ2 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SIMC1Q8NDZ2 AC009336.1-201ENST00000608941 1553 ntBASIC16.26■□□□□ 0.19
SIMC1Q8NDZ2 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SIMC1Q8NDZ2 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
SIMC1Q8NDZ2 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SIMC1Q8NDZ2 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SIMC1Q8NDZ2 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SIMC1Q8NDZ2 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SIMC1Q8NDZ2 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SIMC1Q8NDZ2 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SIMC1Q8NDZ2 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SIMC1Q8NDZ2 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.26■□□□□ 0.19
SIMC1Q8NDZ2 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SIMC1Q8NDZ2 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SIMC1Q8NDZ2 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.26■□□□□ 0.19
SIMC1Q8NDZ2 AL121772.3-201ENST00000610840 674 ntBASIC16.26■□□□□ 0.19
SIMC1Q8NDZ2 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.26■□□□□ 0.19
SIMC1Q8NDZ2 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.26■□□□□ 0.19
SIMC1Q8NDZ2 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SIMC1Q8NDZ2 AC022211.2-201ENST00000585075 2527 ntBASIC16.26■□□□□ 0.19
SIMC1Q8NDZ2 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SIMC1Q8NDZ2 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.26■□□□□ 0.19
SIMC1Q8NDZ2 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.26■□□□□ 0.19
SIMC1Q8NDZ2 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SIMC1Q8NDZ2 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SIMC1Q8NDZ2 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SIMC1Q8NDZ2 AP005117.1-201ENST00000584346 1413 ntBASIC16.26■□□□□ 0.19
SIMC1Q8NDZ2 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.26■□□□□ 0.19
SIMC1Q8NDZ2 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
SIMC1Q8NDZ2 AC103702.1-201ENST00000548801 2630 ntBASIC16.26■□□□□ 0.19
SIMC1Q8NDZ2 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SIMC1Q8NDZ2 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SIMC1Q8NDZ2 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
SIMC1Q8NDZ2 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SIMC1Q8NDZ2 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SIMC1Q8NDZ2 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SIMC1Q8NDZ2 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SIMC1Q8NDZ2 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SIMC1Q8NDZ2 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.26■□□□□ 0.19
SIMC1Q8NDZ2 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SIMC1Q8NDZ2 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SIMC1Q8NDZ2 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SIMC1Q8NDZ2 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SIMC1Q8NDZ2 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.25■□□□□ 0.19
SIMC1Q8NDZ2 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SIMC1Q8NDZ2 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
SIMC1Q8NDZ2 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
SIMC1Q8NDZ2 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SIMC1Q8NDZ2 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SIMC1Q8NDZ2 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
SIMC1Q8NDZ2 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
SIMC1Q8NDZ2 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SIMC1Q8NDZ2 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SIMC1Q8NDZ2 KLF4P1-201ENST00000412782 1185 ntBASIC16.25■□□□□ 0.19
SIMC1Q8NDZ2 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SIMC1Q8NDZ2 STK19B-204ENST00000512515 211 ntBASIC16.25■□□□□ 0.19
SIMC1Q8NDZ2 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.25■□□□□ 0.19
SIMC1Q8NDZ2 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
SIMC1Q8NDZ2 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SIMC1Q8NDZ2 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
SIMC1Q8NDZ2 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.25■□□□□ 0.19
SIMC1Q8NDZ2 IFNL4P1-201ENST00000607083 540 ntBASIC16.25■□□□□ 0.19
SIMC1Q8NDZ2 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.25■□□□□ 0.19
SIMC1Q8NDZ2 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SIMC1Q8NDZ2 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SIMC1Q8NDZ2 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
SIMC1Q8NDZ2 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SIMC1Q8NDZ2 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.25■□□□□ 0.19
SIMC1Q8NDZ2 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SIMC1Q8NDZ2 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.25■□□□□ 0.19
SIMC1Q8NDZ2 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms