Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC26.6■■□□□ 1.85
CFAP43Q8NDM7 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC26.6■■□□□ 1.85
CFAP43Q8NDM7 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
CFAP43Q8NDM7 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC26.6■■□□□ 1.85
CFAP43Q8NDM7 U91328.1-201ENST00000437528 223 ntBASIC26.6■■□□□ 1.85
CFAP43Q8NDM7 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC26.6■■□□□ 1.85
CFAP43Q8NDM7 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC26.6■■□□□ 1.85
CFAP43Q8NDM7 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CFAP43Q8NDM7 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC26.6■■□□□ 1.85
CFAP43Q8NDM7 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC26.6■■□□□ 1.85
CFAP43Q8NDM7 GNAS-203ENST00000306120 1878 ntBASIC26.6■■□□□ 1.85
CFAP43Q8NDM7 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CFAP43Q8NDM7 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC26.6■■□□□ 1.85
CFAP43Q8NDM7 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC26.6■■□□□ 1.85
CFAP43Q8NDM7 PXK-206ENST00000463280 2825 ntTSL 2 BASIC26.6■■□□□ 1.85
CFAP43Q8NDM7 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC26.6■■□□□ 1.85
CFAP43Q8NDM7 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
CFAP43Q8NDM7 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC26.6■■□□□ 1.85
CFAP43Q8NDM7 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
CFAP43Q8NDM7 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC26.6■■□□□ 1.85
CFAP43Q8NDM7 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC26.6■■□□□ 1.85
CFAP43Q8NDM7 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC26.6■■□□□ 1.85
CFAP43Q8NDM7 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
CFAP43Q8NDM7 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC26.59■■□□□ 1.85
CFAP43Q8NDM7 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC26.59■■□□□ 1.85
CFAP43Q8NDM7 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
CFAP43Q8NDM7 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
CFAP43Q8NDM7 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC26.59■■□□□ 1.85
CFAP43Q8NDM7 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC26.59■■□□□ 1.85
CFAP43Q8NDM7 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
CFAP43Q8NDM7 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
CFAP43Q8NDM7 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC26.59■■□□□ 1.85
CFAP43Q8NDM7 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
CFAP43Q8NDM7 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC26.59■■□□□ 1.85
CFAP43Q8NDM7 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC26.59■■□□□ 1.85
CFAP43Q8NDM7 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC26.59■■□□□ 1.85
CFAP43Q8NDM7 AC009118.2-201ENST00000613275 655 ntBASIC26.59■■□□□ 1.85
CFAP43Q8NDM7 AL662799.1-202ENST00000614205 422 ntBASIC26.59■■□□□ 1.85
CFAP43Q8NDM7 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
CFAP43Q8NDM7 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
CFAP43Q8NDM7 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CFAP43Q8NDM7 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC26.58■■□□□ 1.85
CFAP43Q8NDM7 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CFAP43Q8NDM7 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CFAP43Q8NDM7 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC26.58■■□□□ 1.85
CFAP43Q8NDM7 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC26.58■■□□□ 1.85
CFAP43Q8NDM7 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC26.58■■□□□ 1.85
CFAP43Q8NDM7 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC26.58■■□□□ 1.85
CFAP43Q8NDM7 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC26.58■■□□□ 1.85
CFAP43Q8NDM7 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC26.58■■□□□ 1.85
CFAP43Q8NDM7 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC26.58■■□□□ 1.85
CFAP43Q8NDM7 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC26.58■■□□□ 1.85
CFAP43Q8NDM7 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
CFAP43Q8NDM7 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CFAP43Q8NDM7 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC26.58■■□□□ 1.85
CFAP43Q8NDM7 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC26.58■■□□□ 1.85
CFAP43Q8NDM7 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CFAP43Q8NDM7 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC26.58■■□□□ 1.85
CFAP43Q8NDM7 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC26.58■■□□□ 1.84
CFAP43Q8NDM7 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CFAP43Q8NDM7 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC26.57■■□□□ 1.84
CFAP43Q8NDM7 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC26.57■■□□□ 1.84
CFAP43Q8NDM7 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
CFAP43Q8NDM7 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC26.57■■□□□ 1.84
CFAP43Q8NDM7 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC26.57■■□□□ 1.84
CFAP43Q8NDM7 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC26.57■■□□□ 1.84
CFAP43Q8NDM7 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
CFAP43Q8NDM7 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC26.57■■□□□ 1.84
CFAP43Q8NDM7 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
CFAP43Q8NDM7 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC26.57■■□□□ 1.84
CFAP43Q8NDM7 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC26.57■■□□□ 1.84
CFAP43Q8NDM7 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CFAP43Q8NDM7 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
CFAP43Q8NDM7 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC26.57■■□□□ 1.84
CFAP43Q8NDM7 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CFAP43Q8NDM7 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CFAP43Q8NDM7 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
CFAP43Q8NDM7 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC26.57■■□□□ 1.84
CFAP43Q8NDM7 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
CFAP43Q8NDM7 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CFAP43Q8NDM7 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC26.57■■□□□ 1.84
CFAP43Q8NDM7 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC26.57■■□□□ 1.84
CFAP43Q8NDM7 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
CFAP43Q8NDM7 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC26.57■■□□□ 1.84
CFAP43Q8NDM7 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CFAP43Q8NDM7 TSSK5P-201ENST00000423978 907 ntBASIC26.57■■□□□ 1.84
CFAP43Q8NDM7 NME2P1-201ENST00000426182 414 ntBASIC26.57■■□□□ 1.84
CFAP43Q8NDM7 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC26.57■■□□□ 1.84
CFAP43Q8NDM7 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
CFAP43Q8NDM7 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC26.57■■□□□ 1.84
CFAP43Q8NDM7 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC26.57■■□□□ 1.84
CFAP43Q8NDM7 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC26.57■■□□□ 1.84
CFAP43Q8NDM7 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CFAP43Q8NDM7 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
CFAP43Q8NDM7 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CFAP43Q8NDM7 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC26.56■■□□□ 1.84
CFAP43Q8NDM7 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
CFAP43Q8NDM7 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC26.56■■□□□ 1.84
CFAP43Q8NDM7 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CFAP43Q8NDM7 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC26.56■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms