Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 TAF8-206ENST00000472818 719 ntTSL 2 BASIC17.05■□□□□ 0.32
TMEFF1Q8IYR6 INGX-202ENST00000489074 768 ntBASIC17.05■□□□□ 0.32
TMEFF1Q8IYR6 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC17.05■□□□□ 0.32
TMEFF1Q8IYR6 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.05■□□□□ 0.32
TMEFF1Q8IYR6 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
TMEFF1Q8IYR6 AJ011932.1-201ENST00000621707 465 ntBASIC17.05■□□□□ 0.32
TMEFF1Q8IYR6 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TMEFF1Q8IYR6 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TMEFF1Q8IYR6 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TMEFF1Q8IYR6 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TMEFF1Q8IYR6 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TMEFF1Q8IYR6 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.05■□□□□ 0.32
TMEFF1Q8IYR6 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.05■□□□□ 0.32
TMEFF1Q8IYR6 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TMEFF1Q8IYR6 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
TMEFF1Q8IYR6 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.05■□□□□ 0.32
TMEFF1Q8IYR6 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.05■□□□□ 0.32
TMEFF1Q8IYR6 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.05■□□□□ 0.32
TMEFF1Q8IYR6 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TMEFF1Q8IYR6 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TMEFF1Q8IYR6 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TMEFF1Q8IYR6 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TMEFF1Q8IYR6 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TMEFF1Q8IYR6 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TMEFF1Q8IYR6 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.05■□□□□ 0.32
TMEFF1Q8IYR6 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
TMEFF1Q8IYR6 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TMEFF1Q8IYR6 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.04■□□□□ 0.32
TMEFF1Q8IYR6 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.04■□□□□ 0.32
TMEFF1Q8IYR6 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TMEFF1Q8IYR6 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TMEFF1Q8IYR6 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.04■□□□□ 0.32
TMEFF1Q8IYR6 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.04■□□□□ 0.32
TMEFF1Q8IYR6 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
TMEFF1Q8IYR6 AL390961.4-201ENST00000623958 2535 ntBASIC17.04■□□□□ 0.32
TMEFF1Q8IYR6 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.04■□□□□ 0.32
TMEFF1Q8IYR6 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TMEFF1Q8IYR6 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
TMEFF1Q8IYR6 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TMEFF1Q8IYR6 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
TMEFF1Q8IYR6 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TMEFF1Q8IYR6 PMS2P4-201ENST00000412466 1052 ntBASIC17.04■□□□□ 0.32
TMEFF1Q8IYR6 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17.04■□□□□ 0.32
TMEFF1Q8IYR6 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC17.04■□□□□ 0.32
TMEFF1Q8IYR6 AC140658.5-201ENST00000438532 169 ntBASIC17.04■□□□□ 0.32
TMEFF1Q8IYR6 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TMEFF1Q8IYR6 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC17.04■□□□□ 0.32
TMEFF1Q8IYR6 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
TMEFF1Q8IYR6 AC079140.1-201ENST00000508039 487 ntBASIC17.04■□□□□ 0.32
TMEFF1Q8IYR6 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.04■□□□□ 0.32
TMEFF1Q8IYR6 AC015911.4-201ENST00000588022 1070 ntBASIC17.04■□□□□ 0.32
TMEFF1Q8IYR6 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.04■□□□□ 0.32
TMEFF1Q8IYR6 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC17.04■□□□□ 0.32
TMEFF1Q8IYR6 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TMEFF1Q8IYR6 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.04■□□□□ 0.32
TMEFF1Q8IYR6 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
TMEFF1Q8IYR6 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TMEFF1Q8IYR6 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
TMEFF1Q8IYR6 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TMEFF1Q8IYR6 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TMEFF1Q8IYR6 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
TMEFF1Q8IYR6 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TMEFF1Q8IYR6 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TMEFF1Q8IYR6 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.04■□□□□ 0.32
TMEFF1Q8IYR6 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.04■□□□□ 0.32
TMEFF1Q8IYR6 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.04■□□□□ 0.32
TMEFF1Q8IYR6 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.04■□□□□ 0.32
TMEFF1Q8IYR6 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
TMEFF1Q8IYR6 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TMEFF1Q8IYR6 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.03■□□□□ 0.32
TMEFF1Q8IYR6 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TMEFF1Q8IYR6 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TMEFF1Q8IYR6 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.03■□□□□ 0.32
TMEFF1Q8IYR6 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TMEFF1Q8IYR6 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
TMEFF1Q8IYR6 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TMEFF1Q8IYR6 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TMEFF1Q8IYR6 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TMEFF1Q8IYR6 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.03■□□□□ 0.32
TMEFF1Q8IYR6 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TMEFF1Q8IYR6 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
TMEFF1Q8IYR6 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.03■□□□□ 0.32
TMEFF1Q8IYR6 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
TMEFF1Q8IYR6 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TMEFF1Q8IYR6 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TMEFF1Q8IYR6 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
TMEFF1Q8IYR6 KRT18P55-202ENST00000578578 1546 ntBASIC17.03■□□□□ 0.32
TMEFF1Q8IYR6 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TMEFF1Q8IYR6 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TMEFF1Q8IYR6 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC17.03■□□□□ 0.32
TMEFF1Q8IYR6 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.03■□□□□ 0.32
TMEFF1Q8IYR6 TFAMP1-201ENST00000412727 736 ntBASIC17.03■□□□□ 0.32
TMEFF1Q8IYR6 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.03■□□□□ 0.32
TMEFF1Q8IYR6 KRT18P32-201ENST00000424695 1287 ntBASIC17.03■□□□□ 0.32
TMEFF1Q8IYR6 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.03■□□□□ 0.32
TMEFF1Q8IYR6 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.03■□□□□ 0.32
TMEFF1Q8IYR6 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.03■□□□□ 0.32
TMEFF1Q8IYR6 AQP6-203ENST00000551733 849 ntTSL 3 BASIC17.03■□□□□ 0.32
TMEFF1Q8IYR6 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TMEFF1Q8IYR6 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms