Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC18.14■□□□□ 0.49
SCN4BQ8IWT1 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SCN4BQ8IWT1 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
SCN4BQ8IWT1 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SCN4BQ8IWT1 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC18.14■□□□□ 0.49
SCN4BQ8IWT1 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SCN4BQ8IWT1 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SCN4BQ8IWT1 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SCN4BQ8IWT1 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
SCN4BQ8IWT1 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SCN4BQ8IWT1 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.13■□□□□ 0.49
SCN4BQ8IWT1 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
SCN4BQ8IWT1 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SCN4BQ8IWT1 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SCN4BQ8IWT1 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
SCN4BQ8IWT1 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SCN4BQ8IWT1 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
SCN4BQ8IWT1 MIR1233-2-201ENST00000408138 82 ntBASIC18.13■□□□□ 0.49
SCN4BQ8IWT1 MIR1233-1-201ENST00000408722 82 ntBASIC18.13■□□□□ 0.49
SCN4BQ8IWT1 ATP6V0CP3-201ENST00000417255 467 ntBASIC18.13■□□□□ 0.49
SCN4BQ8IWT1 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC18.13■□□□□ 0.49
SCN4BQ8IWT1 CD63-210ENST00000550776 870 ntTSL 5 BASIC18.13■□□□□ 0.49
SCN4BQ8IWT1 AC002347.1-201ENST00000569543 541 ntBASIC18.13■□□□□ 0.49
SCN4BQ8IWT1 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18.13■□□□□ 0.49
SCN4BQ8IWT1 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC18.13■□□□□ 0.49
SCN4BQ8IWT1 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SCN4BQ8IWT1 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SCN4BQ8IWT1 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SCN4BQ8IWT1 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
SCN4BQ8IWT1 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SCN4BQ8IWT1 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SCN4BQ8IWT1 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SCN4BQ8IWT1 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.13■□□□□ 0.49
SCN4BQ8IWT1 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
SCN4BQ8IWT1 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SCN4BQ8IWT1 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SCN4BQ8IWT1 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SCN4BQ8IWT1 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SCN4BQ8IWT1 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
SCN4BQ8IWT1 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SCN4BQ8IWT1 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SCN4BQ8IWT1 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.12■□□□□ 0.49
SCN4BQ8IWT1 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SCN4BQ8IWT1 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.12■□□□□ 0.49
SCN4BQ8IWT1 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
SCN4BQ8IWT1 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SCN4BQ8IWT1 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
SCN4BQ8IWT1 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.12■□□□□ 0.49
SCN4BQ8IWT1 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SCN4BQ8IWT1 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC18.12■□□□□ 0.49
SCN4BQ8IWT1 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SCN4BQ8IWT1 YBX2P1-201ENST00000394192 760 ntBASIC18.12■□□□□ 0.49
SCN4BQ8IWT1 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC18.12■□□□□ 0.49
SCN4BQ8IWT1 IGLL3P-201ENST00000412472 434 ntBASIC18.12■□□□□ 0.49
SCN4BQ8IWT1 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.12■□□□□ 0.49
SCN4BQ8IWT1 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.12■□□□□ 0.49
SCN4BQ8IWT1 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC18.12■□□□□ 0.49
SCN4BQ8IWT1 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SCN4BQ8IWT1 OR7E47P-204ENST00000575924 449 ntBASIC18.12■□□□□ 0.49
SCN4BQ8IWT1 AC010327.4-202ENST00000591484 748 ntBASIC18.12■□□□□ 0.49
SCN4BQ8IWT1 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
SCN4BQ8IWT1 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SCN4BQ8IWT1 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC18.12■□□□□ 0.49
SCN4BQ8IWT1 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
SCN4BQ8IWT1 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SCN4BQ8IWT1 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
SCN4BQ8IWT1 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SCN4BQ8IWT1 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SCN4BQ8IWT1 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC18.12■□□□□ 0.49
SCN4BQ8IWT1 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SCN4BQ8IWT1 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
SCN4BQ8IWT1 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SCN4BQ8IWT1 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SCN4BQ8IWT1 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.11■□□□□ 0.49
SCN4BQ8IWT1 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
SCN4BQ8IWT1 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
SCN4BQ8IWT1 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SCN4BQ8IWT1 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
SCN4BQ8IWT1 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC18.11■□□□□ 0.49
SCN4BQ8IWT1 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC18.11■□□□□ 0.49
SCN4BQ8IWT1 POLD4-207ENST00000531239 584 ntTSL 2 BASIC18.11■□□□□ 0.49
SCN4BQ8IWT1 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC18.11■□□□□ 0.49
SCN4BQ8IWT1 AC139530.3-201ENST00000620344 690 ntBASIC18.11■□□□□ 0.49
SCN4BQ8IWT1 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
SCN4BQ8IWT1 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SCN4BQ8IWT1 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.11■□□□□ 0.49
SCN4BQ8IWT1 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
SCN4BQ8IWT1 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.11■□□□□ 0.49
SCN4BQ8IWT1 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.11■□□□□ 0.49
SCN4BQ8IWT1 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.11■□□□□ 0.49
SCN4BQ8IWT1 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SCN4BQ8IWT1 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SCN4BQ8IWT1 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.11■□□□□ 0.49
SCN4BQ8IWT1 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SCN4BQ8IWT1 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SCN4BQ8IWT1 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SCN4BQ8IWT1 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SCN4BQ8IWT1 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
SCN4BQ8IWT1 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.1■□□□□ 0.49
SCN4BQ8IWT1 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms