Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 DDT-204ENST00000404092 805 ntTSL 3 BASIC19.05■□□□□ 0.64
CCDC60Q8IWA6 AC004967.1-201ENST00000453589 447 ntBASIC19.05■□□□□ 0.64
CCDC60Q8IWA6 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC19.05■□□□□ 0.64
CCDC60Q8IWA6 AC074386.1-202ENST00000463561 864 ntBASIC19.05■□□□□ 0.64
CCDC60Q8IWA6 YBX1P5-201ENST00000509441 847 ntBASIC19.05■□□□□ 0.64
CCDC60Q8IWA6 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC19.05■□□□□ 0.64
CCDC60Q8IWA6 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CCDC60Q8IWA6 AC005829.1-201ENST00000570002 483 ntBASIC19.05■□□□□ 0.64
CCDC60Q8IWA6 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC19.05■□□□□ 0.64
CCDC60Q8IWA6 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC60Q8IWA6 C20orf181-201ENST00000623918 480 ntBASIC19.05■□□□□ 0.64
CCDC60Q8IWA6 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC60Q8IWA6 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.05■□□□□ 0.64
CCDC60Q8IWA6 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC60Q8IWA6 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC19.05■□□□□ 0.64
CCDC60Q8IWA6 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC60Q8IWA6 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC60Q8IWA6 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.05■□□□□ 0.64
CCDC60Q8IWA6 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC60Q8IWA6 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC19.05■□□□□ 0.64
CCDC60Q8IWA6 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CCDC60Q8IWA6 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC60Q8IWA6 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC60Q8IWA6 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC60Q8IWA6 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC60Q8IWA6 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC60Q8IWA6 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CCDC60Q8IWA6 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC19.04■□□□□ 0.64
CCDC60Q8IWA6 AL513480.1-201ENST00000451731 511 ntBASIC19.04■□□□□ 0.64
CCDC60Q8IWA6 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC19.04■□□□□ 0.64
CCDC60Q8IWA6 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.04■□□□□ 0.64
CCDC60Q8IWA6 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC19.04■□□□□ 0.64
CCDC60Q8IWA6 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC19.04■□□□□ 0.64
CCDC60Q8IWA6 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC19.04■□□□□ 0.64
CCDC60Q8IWA6 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC60Q8IWA6 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CCDC60Q8IWA6 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC60Q8IWA6 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC19.04■□□□□ 0.64
CCDC60Q8IWA6 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
CCDC60Q8IWA6 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC60Q8IWA6 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC60Q8IWA6 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC19.03■□□□□ 0.64
CCDC60Q8IWA6 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC60Q8IWA6 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC19.03■□□□□ 0.64
CCDC60Q8IWA6 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC60Q8IWA6 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC60Q8IWA6 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC60Q8IWA6 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC60Q8IWA6 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC60Q8IWA6 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC60Q8IWA6 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC60Q8IWA6 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
CCDC60Q8IWA6 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC60Q8IWA6 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC19.03■□□□□ 0.64
CCDC60Q8IWA6 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC19.03■□□□□ 0.64
CCDC60Q8IWA6 HTR5BP-201ENST00000430851 1154 ntBASIC19.03■□□□□ 0.64
CCDC60Q8IWA6 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC19.03■□□□□ 0.64
CCDC60Q8IWA6 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC60Q8IWA6 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
CCDC60Q8IWA6 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC19.03■□□□□ 0.64
CCDC60Q8IWA6 MIR4469-201ENST00000583919 79 ntBASIC19.03■□□□□ 0.64
CCDC60Q8IWA6 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC60Q8IWA6 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC19.03■□□□□ 0.64
CCDC60Q8IWA6 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC19.03■□□□□ 0.64
CCDC60Q8IWA6 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC19.03■□□□□ 0.64
CCDC60Q8IWA6 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CCDC60Q8IWA6 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC60Q8IWA6 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC60Q8IWA6 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC60Q8IWA6 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC60Q8IWA6 AC092919.2-201ENST00000623631 1645 ntBASIC19.03■□□□□ 0.64
CCDC60Q8IWA6 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC60Q8IWA6 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC60Q8IWA6 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC60Q8IWA6 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC60Q8IWA6 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC60Q8IWA6 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.02■□□□□ 0.64
CCDC60Q8IWA6 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC60Q8IWA6 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC60Q8IWA6 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC60Q8IWA6 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC60Q8IWA6 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC60Q8IWA6 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
CCDC60Q8IWA6 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC60Q8IWA6 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC19.02■□□□□ 0.64
CCDC60Q8IWA6 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
CCDC60Q8IWA6 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC60Q8IWA6 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC19.02■□□□□ 0.64
CCDC60Q8IWA6 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC60Q8IWA6 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC19.02■□□□□ 0.64
CCDC60Q8IWA6 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC60Q8IWA6 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC19.02■□□□□ 0.64
CCDC60Q8IWA6 RPS8P6-201ENST00000426177 609 ntBASIC19.02■□□□□ 0.64
CCDC60Q8IWA6 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC19.02■□□□□ 0.64
CCDC60Q8IWA6 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC19.02■□□□□ 0.64
CCDC60Q8IWA6 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC19.02■□□□□ 0.64
CCDC60Q8IWA6 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC60Q8IWA6 MED16-214ENST00000617672 554 ntTSL 5 BASIC19.02■□□□□ 0.64
CCDC60Q8IWA6 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC60Q8IWA6 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms