Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CDKL3Q8IVW4 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDKL3Q8IVW4 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDKL3Q8IVW4 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CDKL3Q8IVW4 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.7■□□□□ 0.42
CDKL3Q8IVW4 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.7■□□□□ 0.42
CDKL3Q8IVW4 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.7■□□□□ 0.42
CDKL3Q8IVW4 AL445228.2-201ENST00000605589 952 ntBASIC17.7■□□□□ 0.42
CDKL3Q8IVW4 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDKL3Q8IVW4 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.7■□□□□ 0.42
CDKL3Q8IVW4 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDKL3Q8IVW4 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDKL3Q8IVW4 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.7■□□□□ 0.42
CDKL3Q8IVW4 AC084018.2-201ENST00000613093 2607 ntBASIC17.7■□□□□ 0.42
CDKL3Q8IVW4 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.7■□□□□ 0.42
CDKL3Q8IVW4 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDKL3Q8IVW4 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDKL3Q8IVW4 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDKL3Q8IVW4 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDKL3Q8IVW4 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CDKL3Q8IVW4 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDKL3Q8IVW4 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDKL3Q8IVW4 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDKL3Q8IVW4 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CDKL3Q8IVW4 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDKL3Q8IVW4 AC099398.1-201ENST00000567919 2776 ntBASIC17.69■□□□□ 0.42
CDKL3Q8IVW4 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CDKL3Q8IVW4 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CDKL3Q8IVW4 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.69■□□□□ 0.42
CDKL3Q8IVW4 AC148477.5-201ENST00000625164 1645 ntBASIC17.69■□□□□ 0.42
CDKL3Q8IVW4 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CDKL3Q8IVW4 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
CDKL3Q8IVW4 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.69■□□□□ 0.42
CDKL3Q8IVW4 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDKL3Q8IVW4 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDKL3Q8IVW4 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDKL3Q8IVW4 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDKL3Q8IVW4 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDKL3Q8IVW4 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDKL3Q8IVW4 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDKL3Q8IVW4 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDKL3Q8IVW4 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDKL3Q8IVW4 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.69■□□□□ 0.42
CDKL3Q8IVW4 ABCD1P5-201ENST00000445663 754 ntBASIC17.69■□□□□ 0.42
CDKL3Q8IVW4 MIR5100-201ENST00000579544 119 ntBASIC17.69■□□□□ 0.42
CDKL3Q8IVW4 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.69■□□□□ 0.42
CDKL3Q8IVW4 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDKL3Q8IVW4 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.69■□□□□ 0.42
CDKL3Q8IVW4 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDKL3Q8IVW4 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDKL3Q8IVW4 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.69■□□□□ 0.42
CDKL3Q8IVW4 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.69■□□□□ 0.42
CDKL3Q8IVW4 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
CDKL3Q8IVW4 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDKL3Q8IVW4 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDKL3Q8IVW4 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.69■□□□□ 0.42
CDKL3Q8IVW4 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDKL3Q8IVW4 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDKL3Q8IVW4 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDKL3Q8IVW4 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDKL3Q8IVW4 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.68■□□□□ 0.42
CDKL3Q8IVW4 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.68■□□□□ 0.42
CDKL3Q8IVW4 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDKL3Q8IVW4 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.68■□□□□ 0.42
CDKL3Q8IVW4 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.68■□□□□ 0.42
CDKL3Q8IVW4 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CDKL3Q8IVW4 FRMD8P1-201ENST00000440433 1524 ntBASIC17.68■□□□□ 0.42
CDKL3Q8IVW4 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.68■□□□□ 0.42
CDKL3Q8IVW4 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDKL3Q8IVW4 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CDKL3Q8IVW4 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDKL3Q8IVW4 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CDKL3Q8IVW4 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.68■□□□□ 0.42
CDKL3Q8IVW4 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.68■□□□□ 0.42
CDKL3Q8IVW4 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CDKL3Q8IVW4 ACTG1P4-201ENST00000425123 1122 ntBASIC17.68■□□□□ 0.42
CDKL3Q8IVW4 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDKL3Q8IVW4 NUS1P1-201ENST00000446295 882 ntBASIC17.68■□□□□ 0.42
CDKL3Q8IVW4 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.68■□□□□ 0.42
CDKL3Q8IVW4 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.68■□□□□ 0.42
CDKL3Q8IVW4 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDKL3Q8IVW4 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.68■□□□□ 0.42
CDKL3Q8IVW4 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.68■□□□□ 0.42
CDKL3Q8IVW4 AC092068.3-201ENST00000587894 2016 ntBASIC17.68■□□□□ 0.42
CDKL3Q8IVW4 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.68■□□□□ 0.42
CDKL3Q8IVW4 SIGLEC16-201ENST00000599858 1437 ntBASIC17.68■□□□□ 0.42
CDKL3Q8IVW4 AC093458.2-201ENST00000623150 629 ntBASIC17.68■□□□□ 0.42
CDKL3Q8IVW4 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDKL3Q8IVW4 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CDKL3Q8IVW4 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDKL3Q8IVW4 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDKL3Q8IVW4 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CDKL3Q8IVW4 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.67■□□□□ 0.42
CDKL3Q8IVW4 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDKL3Q8IVW4 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDKL3Q8IVW4 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDKL3Q8IVW4 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDKL3Q8IVW4 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDKL3Q8IVW4 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDKL3Q8IVW4 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms