Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LINC00346Q8IVM7 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LINC00346Q8IVM7 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LINC00346Q8IVM7 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
LINC00346Q8IVM7 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINC00346Q8IVM7 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINC00346Q8IVM7 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.26■□□□□ 0.03
LINC00346Q8IVM7 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
LINC00346Q8IVM7 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINC00346Q8IVM7 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LINC00346Q8IVM7 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.26■□□□□ 0.03
LINC00346Q8IVM7 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
LINC00346Q8IVM7 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.26■□□□□ 0.03
LINC00346Q8IVM7 AC092068.3-201ENST00000587894 2016 ntBASIC15.26■□□□□ 0.03
LINC00346Q8IVM7 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.26■□□□□ 0.03
LINC00346Q8IVM7 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINC00346Q8IVM7 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINC00346Q8IVM7 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.26■□□□□ 0.03
LINC00346Q8IVM7 AC003669.1-201ENST00000334569 611 ntBASIC15.26■□□□□ 0.03
LINC00346Q8IVM7 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
LINC00346Q8IVM7 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.26■□□□□ 0.03
LINC00346Q8IVM7 RCN1P2-201ENST00000398357 915 ntBASIC15.26■□□□□ 0.03
LINC00346Q8IVM7 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINC00346Q8IVM7 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC15.26■□□□□ 0.03
LINC00346Q8IVM7 CDV3-207ENST00000508481 661 ntTSL 3 BASIC15.26■□□□□ 0.03
LINC00346Q8IVM7 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC15.26■□□□□ 0.03
LINC00346Q8IVM7 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.26■□□□□ 0.03
LINC00346Q8IVM7 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC15.26■□□□□ 0.03
LINC00346Q8IVM7 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINC00346Q8IVM7 MPI-205ENST00000562606 1052 ntTSL 3 BASIC15.26■□□□□ 0.03
LINC00346Q8IVM7 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINC00346Q8IVM7 AC069148.1-201ENST00000608741 768 ntBASIC15.26■□□□□ 0.03
LINC00346Q8IVM7 BCL10-202ENST00000620248 774 ntTSL 5 BASIC15.26■□□□□ 0.03
LINC00346Q8IVM7 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.26■□□□□ 0.03
LINC00346Q8IVM7 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
LINC00346Q8IVM7 AC105020.1-201ENST00000435356 2205 ntBASIC15.26■□□□□ 0.03
LINC00346Q8IVM7 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINC00346Q8IVM7 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.26■□□□□ 0.03
LINC00346Q8IVM7 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.26■□□□□ 0.03
LINC00346Q8IVM7 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINC00346Q8IVM7 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINC00346Q8IVM7 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.26■□□□□ 0.03
LINC00346Q8IVM7 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINC00346Q8IVM7 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINC00346Q8IVM7 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LINC00346Q8IVM7 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LINC00346Q8IVM7 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LINC00346Q8IVM7 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINC00346Q8IVM7 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINC00346Q8IVM7 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LINC00346Q8IVM7 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
LINC00346Q8IVM7 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINC00346Q8IVM7 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
LINC00346Q8IVM7 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINC00346Q8IVM7 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINC00346Q8IVM7 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LINC00346Q8IVM7 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINC00346Q8IVM7 INTS4P1-201ENST00000438455 1935 ntBASIC15.25■□□□□ 0.03
LINC00346Q8IVM7 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LINC00346Q8IVM7 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC15.25■□□□□ 0.03
LINC00346Q8IVM7 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINC00346Q8IVM7 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.25■□□□□ 0.03
LINC00346Q8IVM7 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LINC00346Q8IVM7 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC15.25■□□□□ 0.03
LINC00346Q8IVM7 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINC00346Q8IVM7 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
LINC00346Q8IVM7 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LINC00346Q8IVM7 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LINC00346Q8IVM7 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINC00346Q8IVM7 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.25■□□□□ 0.03
LINC00346Q8IVM7 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINC00346Q8IVM7 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINC00346Q8IVM7 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.25■□□□□ 0.03
LINC00346Q8IVM7 COPS8-203ENST00000409334 794 ntTSL 5 BASIC15.25■□□□□ 0.03
LINC00346Q8IVM7 IGHV3-47-201ENST00000425060 335 ntBASIC15.25■□□□□ 0.03
LINC00346Q8IVM7 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
LINC00346Q8IVM7 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC15.25■□□□□ 0.03
LINC00346Q8IVM7 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC15.25■□□□□ 0.03
LINC00346Q8IVM7 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC15.25■□□□□ 0.03
LINC00346Q8IVM7 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
LINC00346Q8IVM7 MIR3180-1-201ENST00000580374 94 ntBASIC15.25■□□□□ 0.03
LINC00346Q8IVM7 MIR3180-3-201ENST00000584616 94 ntBASIC15.25■□□□□ 0.03
LINC00346Q8IVM7 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC15.25■□□□□ 0.03
LINC00346Q8IVM7 AC092119.3-201ENST00000612618 583 ntBASIC15.25■□□□□ 0.03
LINC00346Q8IVM7 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC15.25■□□□□ 0.03
LINC00346Q8IVM7 AD001527.2-201ENST00000622994 785 ntBASIC15.25■□□□□ 0.03
LINC00346Q8IVM7 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINC00346Q8IVM7 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LINC00346Q8IVM7 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINC00346Q8IVM7 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINC00346Q8IVM7 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LINC00346Q8IVM7 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINC00346Q8IVM7 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINC00346Q8IVM7 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
LINC00346Q8IVM7 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINC00346Q8IVM7 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LINC00346Q8IVM7 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LINC00346Q8IVM7 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINC00346Q8IVM7 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINC00346Q8IVM7 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms