Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC11.13□□□□□ -0.63
MRPL55Q7Z7F7 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
MRPL55Q7Z7F7 HYMAI.1-201ENST00000620949 238 ntBASIC11.13□□□□□ -0.63
MRPL55Q7Z7F7 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
MRPL55Q7Z7F7 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
MRPL55Q7Z7F7 WDR6-223ENST00000627177 207 ntTSL 2 BASIC11.13□□□□□ -0.63
MRPL55Q7Z7F7 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
MRPL55Q7Z7F7 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC11.13□□□□□ -0.63
MRPL55Q7Z7F7 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
MRPL55Q7Z7F7 AC009053.2-201ENST00000563701 2365 ntBASIC11.13□□□□□ -0.63
MRPL55Q7Z7F7 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
MRPL55Q7Z7F7 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
MRPL55Q7Z7F7 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
MRPL55Q7Z7F7 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC11.13□□□□□ -0.63
MRPL55Q7Z7F7 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
MRPL55Q7Z7F7 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC11.13□□□□□ -0.63
MRPL55Q7Z7F7 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC11.13□□□□□ -0.63
MRPL55Q7Z7F7 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
MRPL55Q7Z7F7 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC11.13□□□□□ -0.63
MRPL55Q7Z7F7 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC11.13□□□□□ -0.63
MRPL55Q7Z7F7 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC11.13□□□□□ -0.63
MRPL55Q7Z7F7 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
MRPL55Q7Z7F7 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
MRPL55Q7Z7F7 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC11.13□□□□□ -0.63
MRPL55Q7Z7F7 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
MRPL55Q7Z7F7 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
MRPL55Q7Z7F7 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
MRPL55Q7Z7F7 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
MRPL55Q7Z7F7 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
MRPL55Q7Z7F7 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
MRPL55Q7Z7F7 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
MRPL55Q7Z7F7 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
MRPL55Q7Z7F7 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
MRPL55Q7Z7F7 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC11.12□□□□□ -0.63
MRPL55Q7Z7F7 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC11.12□□□□□ -0.63
MRPL55Q7Z7F7 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
MRPL55Q7Z7F7 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC11.12□□□□□ -0.63
MRPL55Q7Z7F7 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
MRPL55Q7Z7F7 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
MRPL55Q7Z7F7 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC11.12□□□□□ -0.63
MRPL55Q7Z7F7 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
MRPL55Q7Z7F7 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
MRPL55Q7Z7F7 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
MRPL55Q7Z7F7 DKFZP434A062-201ENST00000573103 5021 ntBASIC11.12□□□□□ -0.63
MRPL55Q7Z7F7 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
MRPL55Q7Z7F7 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
MRPL55Q7Z7F7 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC11.12□□□□□ -0.63
MRPL55Q7Z7F7 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
MRPL55Q7Z7F7 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
MRPL55Q7Z7F7 COX5BP2-201ENST00000392354 334 ntBASIC11.12□□□□□ -0.63
MRPL55Q7Z7F7 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC11.12□□□□□ -0.63
MRPL55Q7Z7F7 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
MRPL55Q7Z7F7 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC11.12□□□□□ -0.63
MRPL55Q7Z7F7 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC11.12□□□□□ -0.63
MRPL55Q7Z7F7 AC022616.7-201ENST00000525383 220 ntBASIC11.12□□□□□ -0.63
MRPL55Q7Z7F7 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC11.12□□□□□ -0.63
MRPL55Q7Z7F7 RNF126P1-202ENST00000569893 925 ntBASIC11.12□□□□□ -0.63
MRPL55Q7Z7F7 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC11.12□□□□□ -0.63
MRPL55Q7Z7F7 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC11.12□□□□□ -0.63
MRPL55Q7Z7F7 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC11.12□□□□□ -0.63
MRPL55Q7Z7F7 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
MRPL55Q7Z7F7 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC11.12□□□□□ -0.63
MRPL55Q7Z7F7 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
MRPL55Q7Z7F7 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
MRPL55Q7Z7F7 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
MRPL55Q7Z7F7 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC11.12□□□□□ -0.63
MRPL55Q7Z7F7 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
MRPL55Q7Z7F7 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC11.12□□□□□ -0.63
MRPL55Q7Z7F7 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
MRPL55Q7Z7F7 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
MRPL55Q7Z7F7 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
MRPL55Q7Z7F7 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
MRPL55Q7Z7F7 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
MRPL55Q7Z7F7 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC11.12□□□□□ -0.63
MRPL55Q7Z7F7 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC11.12□□□□□ -0.63
MRPL55Q7Z7F7 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
MRPL55Q7Z7F7 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
MRPL55Q7Z7F7 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
MRPL55Q7Z7F7 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
MRPL55Q7Z7F7 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC11.12□□□□□ -0.63
MRPL55Q7Z7F7 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
MRPL55Q7Z7F7 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC11.12□□□□□ -0.63
MRPL55Q7Z7F7 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC11.12□□□□□ -0.63
MRPL55Q7Z7F7 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC11.12□□□□□ -0.63
MRPL55Q7Z7F7 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
MRPL55Q7Z7F7 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
MRPL55Q7Z7F7 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
MRPL55Q7Z7F7 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
MRPL55Q7Z7F7 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
MRPL55Q7Z7F7 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
MRPL55Q7Z7F7 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
MRPL55Q7Z7F7 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC11.11□□□□□ -0.63
MRPL55Q7Z7F7 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
MRPL55Q7Z7F7 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
MRPL55Q7Z7F7 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
MRPL55Q7Z7F7 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
MRPL55Q7Z7F7 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
MRPL55Q7Z7F7 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
MRPL55Q7Z7F7 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
MRPL55Q7Z7F7 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms