Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CSMD2Q7Z408 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC14.32□□□□□ -0.12
CSMD2Q7Z408 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CSMD2Q7Z408 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC14.32□□□□□ -0.12
CSMD2Q7Z408 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC14.32□□□□□ -0.12
CSMD2Q7Z408 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CSMD2Q7Z408 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CSMD2Q7Z408 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.32□□□□□ -0.12
CSMD2Q7Z408 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
CSMD2Q7Z408 ARL16-210ENST00000574938 751 ntTSL 2 BASIC14.32□□□□□ -0.12
CSMD2Q7Z408 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC14.32□□□□□ -0.12
CSMD2Q7Z408 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CSMD2Q7Z408 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CSMD2Q7Z408 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
CSMD2Q7Z408 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CSMD2Q7Z408 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CSMD2Q7Z408 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CSMD2Q7Z408 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CSMD2Q7Z408 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CSMD2Q7Z408 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.32□□□□□ -0.12
CSMD2Q7Z408 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.32□□□□□ -0.12
CSMD2Q7Z408 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC14.32□□□□□ -0.12
CSMD2Q7Z408 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.32□□□□□ -0.12
CSMD2Q7Z408 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
CSMD2Q7Z408 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.32□□□□□ -0.12
CSMD2Q7Z408 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CSMD2Q7Z408 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CSMD2Q7Z408 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CSMD2Q7Z408 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CSMD2Q7Z408 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CSMD2Q7Z408 AC016027.1-202ENST00000607927 1699 ntBASIC14.32□□□□□ -0.12
CSMD2Q7Z408 AL031598.1-201ENST00000561511 1773 ntBASIC14.32□□□□□ -0.12
CSMD2Q7Z408 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CSMD2Q7Z408 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CSMD2Q7Z408 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.32□□□□□ -0.12
CSMD2Q7Z408 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.32□□□□□ -0.12
CSMD2Q7Z408 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
CSMD2Q7Z408 HMGA1P7-201ENST00000406908 502 ntBASIC14.32□□□□□ -0.12
CSMD2Q7Z408 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CSMD2Q7Z408 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC14.32□□□□□ -0.12
CSMD2Q7Z408 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
CSMD2Q7Z408 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC14.32□□□□□ -0.12
CSMD2Q7Z408 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC14.32□□□□□ -0.12
CSMD2Q7Z408 AC020907.1-201ENST00000616460 1350 ntBASIC14.32□□□□□ -0.12
CSMD2Q7Z408 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.32□□□□□ -0.12
CSMD2Q7Z408 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC14.32□□□□□ -0.12
CSMD2Q7Z408 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CSMD2Q7Z408 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CSMD2Q7Z408 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CSMD2Q7Z408 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC14.31□□□□□ -0.12
CSMD2Q7Z408 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC14.31□□□□□ -0.12
CSMD2Q7Z408 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CSMD2Q7Z408 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.31□□□□□ -0.12
CSMD2Q7Z408 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CSMD2Q7Z408 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC14.31□□□□□ -0.12
CSMD2Q7Z408 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CSMD2Q7Z408 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CSMD2Q7Z408 DFFBP1-201ENST00000433250 979 ntBASIC14.31□□□□□ -0.12
CSMD2Q7Z408 MFF-223ENST00000524634 647 ntTSL 2 BASIC14.31□□□□□ -0.12
CSMD2Q7Z408 AL512343.1-201ENST00000605837 169 ntBASIC14.31□□□□□ -0.12
CSMD2Q7Z408 AC018529.1-201ENST00000613063 361 ntBASIC14.31□□□□□ -0.12
CSMD2Q7Z408 AC008267.7-201ENST00000624570 1194 ntBASIC14.31□□□□□ -0.12
CSMD2Q7Z408 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CSMD2Q7Z408 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC14.31□□□□□ -0.12
CSMD2Q7Z408 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CSMD2Q7Z408 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CSMD2Q7Z408 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC14.31□□□□□ -0.12
CSMD2Q7Z408 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CSMD2Q7Z408 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CSMD2Q7Z408 AC098614.1-201ENST00000368528 745 ntBASIC14.31□□□□□ -0.12
CSMD2Q7Z408 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CSMD2Q7Z408 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CSMD2Q7Z408 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC14.31□□□□□ -0.12
CSMD2Q7Z408 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC14.31□□□□□ -0.12
CSMD2Q7Z408 TPI1-206ENST00000488464 791 ntTSL 5 BASIC14.31□□□□□ -0.12
CSMD2Q7Z408 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CSMD2Q7Z408 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC14.31□□□□□ -0.12
CSMD2Q7Z408 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CSMD2Q7Z408 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CSMD2Q7Z408 SLC25A24-204ENST00000569674 2357 ntBASIC14.31□□□□□ -0.12
CSMD2Q7Z408 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CSMD2Q7Z408 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
CSMD2Q7Z408 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CSMD2Q7Z408 USP49-202ENST00000373010 2446 ntTSL 5 BASIC14.31□□□□□ -0.12
CSMD2Q7Z408 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CSMD2Q7Z408 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
CSMD2Q7Z408 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CSMD2Q7Z408 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CSMD2Q7Z408 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CSMD2Q7Z408 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.31□□□□□ -0.12
CSMD2Q7Z408 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CSMD2Q7Z408 AC007967.4-201ENST00000614700 386 ntBASIC14.31□□□□□ -0.12
CSMD2Q7Z408 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CSMD2Q7Z408 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CSMD2Q7Z408 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
CSMD2Q7Z408 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC14.3□□□□□ -0.12
CSMD2Q7Z408 BTBD7P1-201ENST00000447253 1453 ntBASIC14.3□□□□□ -0.12
CSMD2Q7Z408 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CSMD2Q7Z408 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CSMD2Q7Z408 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms