Protein–RNA interactions for Protein: Q7Z3J3

RGPD4, RanBP2-like and GRIP domain-containing protein 4, humanhuman

Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4Q7Z3J3 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC21.45■■□□□ 1.02
RGPD4Q7Z3J3 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RGPD4Q7Z3J3 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
RGPD4Q7Z3J3 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC21.44■■□□□ 1.02
RGPD4Q7Z3J3 MIR1908-201ENST00000410394 80 ntBASIC21.44■■□□□ 1.02
RGPD4Q7Z3J3 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC21.44■■□□□ 1.02
RGPD4Q7Z3J3 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RGPD4Q7Z3J3 RAB35-202ENST00000534951 939 ntTSL 2 BASIC21.44■■□□□ 1.02
RGPD4Q7Z3J3 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
RGPD4Q7Z3J3 RRP7BP-205ENST00000566851 833 ntBASIC21.44■■□□□ 1.02
RGPD4Q7Z3J3 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
RGPD4Q7Z3J3 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC21.44■■□□□ 1.02
RGPD4Q7Z3J3 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
RGPD4Q7Z3J3 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RGPD4Q7Z3J3 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RGPD4Q7Z3J3 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RGPD4Q7Z3J3 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RGPD4Q7Z3J3 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC21.44■■□□□ 1.02
RGPD4Q7Z3J3 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RGPD4Q7Z3J3 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RGPD4Q7Z3J3 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
RGPD4Q7Z3J3 AC098850.1-201ENST00000419919 790 ntBASIC21.43■■□□□ 1.02
RGPD4Q7Z3J3 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
RGPD4Q7Z3J3 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC21.43■■□□□ 1.02
RGPD4Q7Z3J3 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC21.43■■□□□ 1.02
RGPD4Q7Z3J3 TPRX2P-201ENST00000535362 881 ntBASIC21.43■■□□□ 1.02
RGPD4Q7Z3J3 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
RGPD4Q7Z3J3 AC023310.3-201ENST00000557027 670 ntBASIC21.43■■□□□ 1.02
RGPD4Q7Z3J3 AC100756.1-201ENST00000562736 682 ntBASIC21.43■■□□□ 1.02
RGPD4Q7Z3J3 AC138749.3-201ENST00000567691 622 ntBASIC21.43■■□□□ 1.02
RGPD4Q7Z3J3 AC105021.1-202ENST00000570572 669 ntBASIC21.43■■□□□ 1.02
RGPD4Q7Z3J3 SRD5A3P1-201ENST00000603021 949 ntBASIC21.43■■□□□ 1.02
RGPD4Q7Z3J3 AC116165.1-201ENST00000611806 668 ntBASIC21.43■■□□□ 1.02
RGPD4Q7Z3J3 MIR6869-201ENST00000619434 62 ntBASIC21.43■■□□□ 1.02
RGPD4Q7Z3J3 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC21.43■■□□□ 1.02
RGPD4Q7Z3J3 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RGPD4Q7Z3J3 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC21.43■■□□□ 1.02
RGPD4Q7Z3J3 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
RGPD4Q7Z3J3 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
RGPD4Q7Z3J3 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC21.43■■□□□ 1.02
RGPD4Q7Z3J3 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RGPD4Q7Z3J3 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RGPD4Q7Z3J3 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC21.43■■□□□ 1.02
RGPD4Q7Z3J3 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC21.43■■□□□ 1.02
RGPD4Q7Z3J3 FTH1-202ENST00000526640 786 ntTSL 2 BASIC21.43■■□□□ 1.02
RGPD4Q7Z3J3 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC21.43■■□□□ 1.02
RGPD4Q7Z3J3 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC21.43■■□□□ 1.02
RGPD4Q7Z3J3 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.42■■□□□ 1.02
RGPD4Q7Z3J3 AP000997.3-201ENST00000623333 2250 ntBASIC21.42■■□□□ 1.02
RGPD4Q7Z3J3 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RGPD4Q7Z3J3 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
RGPD4Q7Z3J3 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC21.42■■□□□ 1.02
RGPD4Q7Z3J3 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC21.42■■□□□ 1.02
RGPD4Q7Z3J3 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RGPD4Q7Z3J3 RPS19-201ENST00000221975 500 ntTSL 3 BASIC21.42■■□□□ 1.02
RGPD4Q7Z3J3 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RGPD4Q7Z3J3 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC21.42■■□□□ 1.02
RGPD4Q7Z3J3 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RGPD4Q7Z3J3 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RGPD4Q7Z3J3 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RGPD4Q7Z3J3 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC21.42■■□□□ 1.02
RGPD4Q7Z3J3 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC21.42■■□□□ 1.02
RGPD4Q7Z3J3 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC21.42■■□□□ 1.02
RGPD4Q7Z3J3 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC21.42■■□□□ 1.02
RGPD4Q7Z3J3 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RGPD4Q7Z3J3 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RGPD4Q7Z3J3 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC21.42■■□□□ 1.02
RGPD4Q7Z3J3 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RGPD4Q7Z3J3 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RGPD4Q7Z3J3 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RGPD4Q7Z3J3 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
RGPD4Q7Z3J3 APOC3-202ENST00000375345 604 ntTSL 5 BASIC21.41■■□□□ 1.02
RGPD4Q7Z3J3 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
RGPD4Q7Z3J3 RBM39-205ENST00000397370 612 ntTSL 2 BASIC21.41■■□□□ 1.02
RGPD4Q7Z3J3 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC21.41■■□□□ 1.02
RGPD4Q7Z3J3 ACTBP11-201ENST00000436287 1126 ntBASIC21.41■■□□□ 1.02
RGPD4Q7Z3J3 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC21.41■■□□□ 1.02
RGPD4Q7Z3J3 PARP8-206ENST00000503665 572 ntTSL 4 BASIC21.41■■□□□ 1.02
RGPD4Q7Z3J3 AC123567.1-201ENST00000548294 1261 ntBASIC21.41■■□□□ 1.02
RGPD4Q7Z3J3 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC21.41■■□□□ 1.02
RGPD4Q7Z3J3 WFDC1-204ENST00000613603 549 ntBASIC21.41■■□□□ 1.02
RGPD4Q7Z3J3 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RGPD4Q7Z3J3 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC21.41■■□□□ 1.02
RGPD4Q7Z3J3 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
RGPD4Q7Z3J3 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC21.41■■□□□ 1.02
RGPD4Q7Z3J3 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RGPD4Q7Z3J3 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RGPD4Q7Z3J3 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RGPD4Q7Z3J3 HARS-204ENST00000438307 1789 ntTSL 2 BASIC21.41■■□□□ 1.02
RGPD4Q7Z3J3 TOP3BP1-201ENST00000420768 1380 ntBASIC21.41■■□□□ 1.02
RGPD4Q7Z3J3 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
RGPD4Q7Z3J3 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RGPD4Q7Z3J3 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RGPD4Q7Z3J3 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RGPD4Q7Z3J3 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
RGPD4Q7Z3J3 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC21.41■■□□□ 1.02
RGPD4Q7Z3J3 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RGPD4Q7Z3J3 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RGPD4Q7Z3J3 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC21.41■■□□□ 1.02
RGPD4Q7Z3J3 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC21.41■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms