Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LYSMD3Q7Z3D4 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LYSMD3Q7Z3D4 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
LYSMD3Q7Z3D4 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.31■□□□□ 0.36
LYSMD3Q7Z3D4 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
LYSMD3Q7Z3D4 AC139887.3-201ENST00000568585 713 ntBASIC17.31■□□□□ 0.36
LYSMD3Q7Z3D4 SLC25A6P4-201ENST00000586535 553 ntBASIC17.31■□□□□ 0.36
LYSMD3Q7Z3D4 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.31■□□□□ 0.36
LYSMD3Q7Z3D4 AC107918.4-202ENST00000641623 219 ntBASIC17.31■□□□□ 0.36
LYSMD3Q7Z3D4 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.31■□□□□ 0.36
LYSMD3Q7Z3D4 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
LYSMD3Q7Z3D4 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LYSMD3Q7Z3D4 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LYSMD3Q7Z3D4 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.31■□□□□ 0.36
LYSMD3Q7Z3D4 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
LYSMD3Q7Z3D4 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
LYSMD3Q7Z3D4 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
LYSMD3Q7Z3D4 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LYSMD3Q7Z3D4 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
LYSMD3Q7Z3D4 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.31■□□□□ 0.36
LYSMD3Q7Z3D4 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
LYSMD3Q7Z3D4 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
LYSMD3Q7Z3D4 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LYSMD3Q7Z3D4 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LYSMD3Q7Z3D4 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LYSMD3Q7Z3D4 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
LYSMD3Q7Z3D4 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LYSMD3Q7Z3D4 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LYSMD3Q7Z3D4 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
LYSMD3Q7Z3D4 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
LYSMD3Q7Z3D4 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LYSMD3Q7Z3D4 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LYSMD3Q7Z3D4 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.3■□□□□ 0.36
LYSMD3Q7Z3D4 LAGE3P1-201ENST00000425356 484 ntBASIC17.3■□□□□ 0.36
LYSMD3Q7Z3D4 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.3■□□□□ 0.36
LYSMD3Q7Z3D4 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.3■□□□□ 0.36
LYSMD3Q7Z3D4 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.3■□□□□ 0.36
LYSMD3Q7Z3D4 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.3■□□□□ 0.36
LYSMD3Q7Z3D4 AL773604.1-201ENST00000617417 272 ntBASIC17.3■□□□□ 0.36
LYSMD3Q7Z3D4 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LYSMD3Q7Z3D4 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LYSMD3Q7Z3D4 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
LYSMD3Q7Z3D4 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LYSMD3Q7Z3D4 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.3■□□□□ 0.36
LYSMD3Q7Z3D4 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LYSMD3Q7Z3D4 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LYSMD3Q7Z3D4 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LYSMD3Q7Z3D4 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.3■□□□□ 0.36
LYSMD3Q7Z3D4 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LYSMD3Q7Z3D4 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LYSMD3Q7Z3D4 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LYSMD3Q7Z3D4 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LYSMD3Q7Z3D4 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LYSMD3Q7Z3D4 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.29■□□□□ 0.36
LYSMD3Q7Z3D4 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
LYSMD3Q7Z3D4 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LYSMD3Q7Z3D4 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
LYSMD3Q7Z3D4 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LYSMD3Q7Z3D4 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.29■□□□□ 0.36
LYSMD3Q7Z3D4 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.29■□□□□ 0.36
LYSMD3Q7Z3D4 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.29■□□□□ 0.36
LYSMD3Q7Z3D4 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.29■□□□□ 0.36
LYSMD3Q7Z3D4 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.29■□□□□ 0.36
LYSMD3Q7Z3D4 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.29■□□□□ 0.36
LYSMD3Q7Z3D4 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.29■□□□□ 0.36
LYSMD3Q7Z3D4 AL353135.1-201ENST00000606729 504 ntBASIC17.29■□□□□ 0.36
LYSMD3Q7Z3D4 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LYSMD3Q7Z3D4 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
LYSMD3Q7Z3D4 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LYSMD3Q7Z3D4 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
LYSMD3Q7Z3D4 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.29■□□□□ 0.36
LYSMD3Q7Z3D4 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.29■□□□□ 0.36
LYSMD3Q7Z3D4 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
LYSMD3Q7Z3D4 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LYSMD3Q7Z3D4 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
LYSMD3Q7Z3D4 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LYSMD3Q7Z3D4 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LYSMD3Q7Z3D4 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
LYSMD3Q7Z3D4 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LYSMD3Q7Z3D4 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LYSMD3Q7Z3D4 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.29■□□□□ 0.36
LYSMD3Q7Z3D4 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
LYSMD3Q7Z3D4 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
LYSMD3Q7Z3D4 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LYSMD3Q7Z3D4 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LYSMD3Q7Z3D4 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LYSMD3Q7Z3D4 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LYSMD3Q7Z3D4 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LYSMD3Q7Z3D4 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
LYSMD3Q7Z3D4 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
LYSMD3Q7Z3D4 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
LYSMD3Q7Z3D4 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LYSMD3Q7Z3D4 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LYSMD3Q7Z3D4 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.28■□□□□ 0.36
LYSMD3Q7Z3D4 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.28■□□□□ 0.36
LYSMD3Q7Z3D4 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LYSMD3Q7Z3D4 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LYSMD3Q7Z3D4 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LYSMD3Q7Z3D4 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.28■□□□□ 0.36
LYSMD3Q7Z3D4 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms