Protein–RNA interactions for Protein: Q70EL3

USP50, Inactive ubiquitin carboxyl-terminal hydrolase 50, humanhuman

Predicted RBP Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP50Q70EL3 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
USP50Q70EL3 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC20.05■□□□□ 0.8
USP50Q70EL3 RPL37AP1-201ENST00000412502 279 ntBASIC20.05■□□□□ 0.8
USP50Q70EL3 AL353705.2-201ENST00000428243 662 ntBASIC20.05■□□□□ 0.8
USP50Q70EL3 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP50Q70EL3 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC20.05■□□□□ 0.8
USP50Q70EL3 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC20.05■□□□□ 0.8
USP50Q70EL3 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC20.05■□□□□ 0.8
USP50Q70EL3 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
USP50Q70EL3 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC20.05■□□□□ 0.8
USP50Q70EL3 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP50Q70EL3 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC20.05■□□□□ 0.8
USP50Q70EL3 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
USP50Q70EL3 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP50Q70EL3 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC20.05■□□□□ 0.8
USP50Q70EL3 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
USP50Q70EL3 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
USP50Q70EL3 BTBD7P1-201ENST00000447253 1453 ntBASIC20.05■□□□□ 0.8
USP50Q70EL3 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP50Q70EL3 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC20.04■□□□□ 0.8
USP50Q70EL3 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
USP50Q70EL3 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP50Q70EL3 FLJ13224-201ENST00000313737 1514 ntBASIC20.04■□□□□ 0.8
USP50Q70EL3 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
USP50Q70EL3 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP50Q70EL3 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC20.04■□□□□ 0.8
USP50Q70EL3 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
USP50Q70EL3 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
USP50Q70EL3 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP50Q70EL3 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP50Q70EL3 HLA-H-201ENST00000383620 1096 ntBASIC20.04■□□□□ 0.8
USP50Q70EL3 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
USP50Q70EL3 GNAQP1-201ENST00000444815 1067 ntBASIC20.04■□□□□ 0.8
USP50Q70EL3 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
USP50Q70EL3 AC135586.1-201ENST00000539323 574 ntBASIC20.04■□□□□ 0.8
USP50Q70EL3 LITAF-210ENST00000571976 548 ntTSL 2 BASIC20.04■□□□□ 0.8
USP50Q70EL3 LITAF-214ENST00000574703 486 ntTSL 2 BASIC20.04■□□□□ 0.8
USP50Q70EL3 AC084346.2-201ENST00000607097 949 ntBASIC20.04■□□□□ 0.8
USP50Q70EL3 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC20.04■□□□□ 0.8
USP50Q70EL3 AL589739.1-201ENST00000607720 493 ntBASIC20.04■□□□□ 0.8
USP50Q70EL3 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP50Q70EL3 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
USP50Q70EL3 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP50Q70EL3 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.04■□□□□ 0.8
USP50Q70EL3 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP50Q70EL3 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
USP50Q70EL3 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
USP50Q70EL3 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP50Q70EL3 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
USP50Q70EL3 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC20.03■□□□□ 0.8
USP50Q70EL3 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
USP50Q70EL3 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.03■□□□□ 0.8
USP50Q70EL3 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC20.03■□□□□ 0.8
USP50Q70EL3 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC20.03■□□□□ 0.8
USP50Q70EL3 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
USP50Q70EL3 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP50Q70EL3 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
USP50Q70EL3 AC022210.1-201ENST00000449856 793 ntBASIC20.03■□□□□ 0.8
USP50Q70EL3 AC092658.1-201ENST00000505836 891 ntBASIC20.03■□□□□ 0.8
USP50Q70EL3 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC20.03■□□□□ 0.8
USP50Q70EL3 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC20.03■□□□□ 0.8
USP50Q70EL3 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
USP50Q70EL3 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC20.02■□□□□ 0.8
USP50Q70EL3 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
USP50Q70EL3 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
USP50Q70EL3 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC20.02■□□□□ 0.8
USP50Q70EL3 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC20.02■□□□□ 0.8
USP50Q70EL3 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
USP50Q70EL3 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
USP50Q70EL3 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
USP50Q70EL3 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
USP50Q70EL3 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
USP50Q70EL3 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
USP50Q70EL3 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC20.02■□□□□ 0.8
USP50Q70EL3 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC20.02■□□□□ 0.8
USP50Q70EL3 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC20.02■□□□□ 0.8
USP50Q70EL3 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
USP50Q70EL3 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
USP50Q70EL3 ZNF890P-202ENST00000530367 1156 ntBASIC20.02■□□□□ 0.8
USP50Q70EL3 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC20.02■□□□□ 0.8
USP50Q70EL3 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC20.02■□□□□ 0.8
USP50Q70EL3 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC20.02■□□□□ 0.8
USP50Q70EL3 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC20.02■□□□□ 0.8
USP50Q70EL3 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC20.02■□□□□ 0.8
USP50Q70EL3 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
USP50Q70EL3 RN7SL828P-201ENST00000607615 303 ntBASIC20.02■□□□□ 0.8
USP50Q70EL3 AC021097.1-201ENST00000607902 574 ntBASIC20.02■□□□□ 0.8
USP50Q70EL3 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC20.02■□□□□ 0.8
USP50Q70EL3 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
USP50Q70EL3 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
USP50Q70EL3 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
USP50Q70EL3 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
USP50Q70EL3 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.02■□□□□ 0.8
USP50Q70EL3 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.02■□□□□ 0.8
USP50Q70EL3 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
USP50Q70EL3 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
USP50Q70EL3 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
USP50Q70EL3 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
USP50Q70EL3 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.79
USP50Q70EL3 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.02■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 444.2 ms