Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.98■□□□□ 0.47
RFWD3Q6PCD5 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.98■□□□□ 0.47
RFWD3Q6PCD5 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.98■□□□□ 0.47
RFWD3Q6PCD5 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.98■□□□□ 0.47
RFWD3Q6PCD5 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RFWD3Q6PCD5 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.98■□□□□ 0.47
RFWD3Q6PCD5 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.98■□□□□ 0.47
RFWD3Q6PCD5 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.98■□□□□ 0.47
RFWD3Q6PCD5 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.98■□□□□ 0.47
RFWD3Q6PCD5 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.98■□□□□ 0.47
RFWD3Q6PCD5 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.98■□□□□ 0.47
RFWD3Q6PCD5 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.98■□□□□ 0.47
RFWD3Q6PCD5 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.98■□□□□ 0.47
RFWD3Q6PCD5 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.98■□□□□ 0.47
RFWD3Q6PCD5 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.98■□□□□ 0.47
RFWD3Q6PCD5 AC105339.3-201ENST00000560043 636 ntBASIC17.98■□□□□ 0.47
RFWD3Q6PCD5 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.98■□□□□ 0.47
RFWD3Q6PCD5 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.98■□□□□ 0.47
RFWD3Q6PCD5 AF228730.7-201ENST00000641842 219 ntBASIC17.98■□□□□ 0.47
RFWD3Q6PCD5 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RFWD3Q6PCD5 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
RFWD3Q6PCD5 AC097637.2-201ENST00000624096 1997 ntBASIC17.98■□□□□ 0.47
RFWD3Q6PCD5 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RFWD3Q6PCD5 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RFWD3Q6PCD5 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.98■□□□□ 0.47
RFWD3Q6PCD5 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.98■□□□□ 0.47
RFWD3Q6PCD5 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.98■□□□□ 0.47
RFWD3Q6PCD5 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RFWD3Q6PCD5 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RFWD3Q6PCD5 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
RFWD3Q6PCD5 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.97■□□□□ 0.47
RFWD3Q6PCD5 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RFWD3Q6PCD5 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RFWD3Q6PCD5 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.97■□□□□ 0.47
RFWD3Q6PCD5 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RFWD3Q6PCD5 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RFWD3Q6PCD5 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.97■□□□□ 0.47
RFWD3Q6PCD5 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.97■□□□□ 0.47
RFWD3Q6PCD5 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.97■□□□□ 0.47
RFWD3Q6PCD5 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
RFWD3Q6PCD5 AL139327.4-201ENST00000612362 153 ntBASIC17.97■□□□□ 0.47
RFWD3Q6PCD5 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.97■□□□□ 0.47
RFWD3Q6PCD5 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RFWD3Q6PCD5 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.97■□□□□ 0.47
RFWD3Q6PCD5 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.97■□□□□ 0.47
RFWD3Q6PCD5 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RFWD3Q6PCD5 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RFWD3Q6PCD5 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RFWD3Q6PCD5 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RFWD3Q6PCD5 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RFWD3Q6PCD5 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RFWD3Q6PCD5 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RFWD3Q6PCD5 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RFWD3Q6PCD5 AC046185.3-201ENST00000623228 1824 ntBASIC17.96■□□□□ 0.47
RFWD3Q6PCD5 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RFWD3Q6PCD5 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RFWD3Q6PCD5 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.96■□□□□ 0.47
RFWD3Q6PCD5 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RFWD3Q6PCD5 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.96■□□□□ 0.47
RFWD3Q6PCD5 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.96■□□□□ 0.47
RFWD3Q6PCD5 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.96■□□□□ 0.47
RFWD3Q6PCD5 AC098831.1-202ENST00000438821 336 ntBASIC17.96■□□□□ 0.47
RFWD3Q6PCD5 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.96■□□□□ 0.47
RFWD3Q6PCD5 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.96■□□□□ 0.47
RFWD3Q6PCD5 RPL13AP23-201ENST00000480739 586 ntBASIC17.96■□□□□ 0.47
RFWD3Q6PCD5 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.96■□□□□ 0.47
RFWD3Q6PCD5 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.96■□□□□ 0.47
RFWD3Q6PCD5 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
RFWD3Q6PCD5 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.96■□□□□ 0.47
RFWD3Q6PCD5 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RFWD3Q6PCD5 AL589182.2-201ENST00000619332 1049 ntBASIC17.96■□□□□ 0.47
RFWD3Q6PCD5 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RFWD3Q6PCD5 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RFWD3Q6PCD5 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RFWD3Q6PCD5 LYSMD4-203ENST00000378904 2122 ntBASIC17.96■□□□□ 0.47
RFWD3Q6PCD5 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RFWD3Q6PCD5 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.96■□□□□ 0.47
RFWD3Q6PCD5 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.96■□□□□ 0.47
RFWD3Q6PCD5 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RFWD3Q6PCD5 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
RFWD3Q6PCD5 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.96■□□□□ 0.46
RFWD3Q6PCD5 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
RFWD3Q6PCD5 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RFWD3Q6PCD5 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RFWD3Q6PCD5 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.95■□□□□ 0.46
RFWD3Q6PCD5 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RFWD3Q6PCD5 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
RFWD3Q6PCD5 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
RFWD3Q6PCD5 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.95■□□□□ 0.46
RFWD3Q6PCD5 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
RFWD3Q6PCD5 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.95■□□□□ 0.46
RFWD3Q6PCD5 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.95■□□□□ 0.46
RFWD3Q6PCD5 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RFWD3Q6PCD5 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
RFWD3Q6PCD5 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RFWD3Q6PCD5 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.95■□□□□ 0.46
RFWD3Q6PCD5 IGHV3-22-201ENST00000520721 359 ntBASIC17.95■□□□□ 0.46
RFWD3Q6PCD5 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RFWD3Q6PCD5 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.95■□□□□ 0.46
RFWD3Q6PCD5 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms