Protein–RNA interactions for Protein: Q6P1Q0

LETMD1, LETM1 domain-containing protein 1, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1Q6P1Q0 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
LETMD1Q6P1Q0 AP000867.3-201ENST00000524675 377 ntBASIC16.66■□□□□ 0.26
LETMD1Q6P1Q0 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.66■□□□□ 0.26
LETMD1Q6P1Q0 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LETMD1Q6P1Q0 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LETMD1Q6P1Q0 AC069148.1-201ENST00000608741 768 ntBASIC16.66■□□□□ 0.26
LETMD1Q6P1Q0 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.66■□□□□ 0.26
LETMD1Q6P1Q0 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.66■□□□□ 0.26
LETMD1Q6P1Q0 AP000867.4-201ENST00000641616 219 ntBASIC16.66■□□□□ 0.26
LETMD1Q6P1Q0 PCDHB19P-201ENST00000570871 2371 ntBASIC16.66■□□□□ 0.26
LETMD1Q6P1Q0 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
LETMD1Q6P1Q0 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LETMD1Q6P1Q0 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LETMD1Q6P1Q0 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LETMD1Q6P1Q0 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LETMD1Q6P1Q0 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
LETMD1Q6P1Q0 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.65■□□□□ 0.26
LETMD1Q6P1Q0 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.65■□□□□ 0.26
LETMD1Q6P1Q0 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LETMD1Q6P1Q0 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
LETMD1Q6P1Q0 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.65■□□□□ 0.26
LETMD1Q6P1Q0 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.65■□□□□ 0.26
LETMD1Q6P1Q0 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
LETMD1Q6P1Q0 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LETMD1Q6P1Q0 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LETMD1Q6P1Q0 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LETMD1Q6P1Q0 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
LETMD1Q6P1Q0 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.65■□□□□ 0.26
LETMD1Q6P1Q0 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LETMD1Q6P1Q0 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.65■□□□□ 0.26
LETMD1Q6P1Q0 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
LETMD1Q6P1Q0 NUS1P1-201ENST00000446295 882 ntBASIC16.65■□□□□ 0.26
LETMD1Q6P1Q0 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LETMD1Q6P1Q0 AC104819.1-201ENST00000504587 486 ntBASIC16.65■□□□□ 0.26
LETMD1Q6P1Q0 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.65■□□□□ 0.26
LETMD1Q6P1Q0 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.65■□□□□ 0.26
LETMD1Q6P1Q0 AC092329.2-201ENST00000598402 547 ntBASIC16.65■□□□□ 0.26
LETMD1Q6P1Q0 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
LETMD1Q6P1Q0 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LETMD1Q6P1Q0 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
LETMD1Q6P1Q0 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.65■□□□□ 0.26
LETMD1Q6P1Q0 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LETMD1Q6P1Q0 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.65■□□□□ 0.26
LETMD1Q6P1Q0 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.65■□□□□ 0.26
LETMD1Q6P1Q0 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LETMD1Q6P1Q0 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LETMD1Q6P1Q0 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
LETMD1Q6P1Q0 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
LETMD1Q6P1Q0 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
LETMD1Q6P1Q0 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
LETMD1Q6P1Q0 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.26
LETMD1Q6P1Q0 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LETMD1Q6P1Q0 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LETMD1Q6P1Q0 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LETMD1Q6P1Q0 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LETMD1Q6P1Q0 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.64■□□□□ 0.25
LETMD1Q6P1Q0 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.64■□□□□ 0.25
LETMD1Q6P1Q0 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LETMD1Q6P1Q0 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LETMD1Q6P1Q0 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LETMD1Q6P1Q0 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.64■□□□□ 0.25
LETMD1Q6P1Q0 SPDYE21P-201ENST00000413323 827 ntBASIC16.64■□□□□ 0.25
LETMD1Q6P1Q0 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
LETMD1Q6P1Q0 KRT18P35-201ENST00000510488 1269 ntBASIC16.64■□□□□ 0.25
LETMD1Q6P1Q0 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.64■□□□□ 0.25
LETMD1Q6P1Q0 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.64■□□□□ 0.25
LETMD1Q6P1Q0 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.64■□□□□ 0.25
LETMD1Q6P1Q0 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
LETMD1Q6P1Q0 AC092119.3-201ENST00000612618 583 ntBASIC16.64■□□□□ 0.25
LETMD1Q6P1Q0 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
LETMD1Q6P1Q0 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
LETMD1Q6P1Q0 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.64■□□□□ 0.25
LETMD1Q6P1Q0 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LETMD1Q6P1Q0 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.64■□□□□ 0.25
LETMD1Q6P1Q0 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LETMD1Q6P1Q0 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LETMD1Q6P1Q0 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.64■□□□□ 0.25
LETMD1Q6P1Q0 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LETMD1Q6P1Q0 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LETMD1Q6P1Q0 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LETMD1Q6P1Q0 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
LETMD1Q6P1Q0 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LETMD1Q6P1Q0 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LETMD1Q6P1Q0 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LETMD1Q6P1Q0 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
LETMD1Q6P1Q0 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LETMD1Q6P1Q0 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.63■□□□□ 0.25
LETMD1Q6P1Q0 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
LETMD1Q6P1Q0 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LETMD1Q6P1Q0 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
LETMD1Q6P1Q0 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.63■□□□□ 0.25
LETMD1Q6P1Q0 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
LETMD1Q6P1Q0 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LETMD1Q6P1Q0 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LETMD1Q6P1Q0 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
LETMD1Q6P1Q0 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
LETMD1Q6P1Q0 POM121L3P-201ENST00000419331 1163 ntBASIC16.63■□□□□ 0.25
LETMD1Q6P1Q0 AL020989.1-201ENST00000422979 469 ntBASIC16.63■□□□□ 0.25
LETMD1Q6P1Q0 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LETMD1Q6P1Q0 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms