Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PPP4R3AQ6IN85 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC19.56■□□□□ 0.72
PPP4R3AQ6IN85 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC19.56■□□□□ 0.72
PPP4R3AQ6IN85 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC19.56■□□□□ 0.72
PPP4R3AQ6IN85 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PPP4R3AQ6IN85 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
PPP4R3AQ6IN85 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC19.56■□□□□ 0.72
PPP4R3AQ6IN85 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
PPP4R3AQ6IN85 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC19.56■□□□□ 0.72
PPP4R3AQ6IN85 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PPP4R3AQ6IN85 PRORSD1P-202ENST00000563365 2154 ntBASIC19.56■□□□□ 0.72
PPP4R3AQ6IN85 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC19.56■□□□□ 0.72
PPP4R3AQ6IN85 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
PPP4R3AQ6IN85 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PPP4R3AQ6IN85 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PPP4R3AQ6IN85 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
PPP4R3AQ6IN85 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC19.55■□□□□ 0.72
PPP4R3AQ6IN85 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
PPP4R3AQ6IN85 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC19.55■□□□□ 0.72
PPP4R3AQ6IN85 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PPP4R3AQ6IN85 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
PPP4R3AQ6IN85 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
PPP4R3AQ6IN85 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PPP4R3AQ6IN85 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
PPP4R3AQ6IN85 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PPP4R3AQ6IN85 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PPP4R3AQ6IN85 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC19.55■□□□□ 0.72
PPP4R3AQ6IN85 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PPP4R3AQ6IN85 AC026396.1-201ENST00000419388 421 ntBASIC19.55■□□□□ 0.72
PPP4R3AQ6IN85 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC19.55■□□□□ 0.72
PPP4R3AQ6IN85 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PPP4R3AQ6IN85 ETFA-208ENST00000559602 792 ntTSL 3 BASIC19.55■□□□□ 0.72
PPP4R3AQ6IN85 AC012640.2-201ENST00000561606 901 ntBASIC19.55■□□□□ 0.72
PPP4R3AQ6IN85 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC19.55■□□□□ 0.72
PPP4R3AQ6IN85 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
PPP4R3AQ6IN85 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
PPP4R3AQ6IN85 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC19.55■□□□□ 0.72
PPP4R3AQ6IN85 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PPP4R3AQ6IN85 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PPP4R3AQ6IN85 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PPP4R3AQ6IN85 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PPP4R3AQ6IN85 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PPP4R3AQ6IN85 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
PPP4R3AQ6IN85 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PPP4R3AQ6IN85 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PPP4R3AQ6IN85 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
PPP4R3AQ6IN85 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PPP4R3AQ6IN85 AC006504.4-201ENST00000592118 1568 ntBASIC19.54■□□□□ 0.72
PPP4R3AQ6IN85 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
PPP4R3AQ6IN85 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PPP4R3AQ6IN85 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PPP4R3AQ6IN85 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
PPP4R3AQ6IN85 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
PPP4R3AQ6IN85 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC19.54■□□□□ 0.72
PPP4R3AQ6IN85 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC19.54■□□□□ 0.72
PPP4R3AQ6IN85 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC19.54■□□□□ 0.72
PPP4R3AQ6IN85 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC19.54■□□□□ 0.72
PPP4R3AQ6IN85 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PPP4R3AQ6IN85 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC19.54■□□□□ 0.72
PPP4R3AQ6IN85 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC19.54■□□□□ 0.72
PPP4R3AQ6IN85 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC19.54■□□□□ 0.72
PPP4R3AQ6IN85 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC19.54■□□□□ 0.72
PPP4R3AQ6IN85 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC19.54■□□□□ 0.72
PPP4R3AQ6IN85 AC105339.3-201ENST00000560043 636 ntBASIC19.54■□□□□ 0.72
PPP4R3AQ6IN85 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC19.54■□□□□ 0.72
PPP4R3AQ6IN85 AP001005.1-201ENST00000571755 1248 ntBASIC19.54■□□□□ 0.72
PPP4R3AQ6IN85 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC19.54■□□□□ 0.72
PPP4R3AQ6IN85 MIR7706-201ENST00000613747 67 ntBASIC19.54■□□□□ 0.72
PPP4R3AQ6IN85 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC19.54■□□□□ 0.72
PPP4R3AQ6IN85 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
PPP4R3AQ6IN85 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PPP4R3AQ6IN85 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
PPP4R3AQ6IN85 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PPP4R3AQ6IN85 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.54■□□□□ 0.72
PPP4R3AQ6IN85 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.54■□□□□ 0.72
PPP4R3AQ6IN85 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PPP4R3AQ6IN85 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC19.54■□□□□ 0.72
PPP4R3AQ6IN85 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC19.54■□□□□ 0.72
PPP4R3AQ6IN85 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PPP4R3AQ6IN85 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
PPP4R3AQ6IN85 LINC02012-201ENST00000608206 1725 ntBASIC19.54■□□□□ 0.72
PPP4R3AQ6IN85 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
PPP4R3AQ6IN85 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PPP4R3AQ6IN85 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PPP4R3AQ6IN85 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
PPP4R3AQ6IN85 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PPP4R3AQ6IN85 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
PPP4R3AQ6IN85 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PPP4R3AQ6IN85 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC19.53■□□□□ 0.72
PPP4R3AQ6IN85 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC19.53■□□□□ 0.72
PPP4R3AQ6IN85 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC19.53■□□□□ 0.72
PPP4R3AQ6IN85 KLK8-205ENST00000593490 267 ntTSL 3 BASIC19.53■□□□□ 0.72
PPP4R3AQ6IN85 AL049840.3-201ENST00000602669 611 ntBASIC19.53■□□□□ 0.72
PPP4R3AQ6IN85 PRKN-208ENST00000610470 531 ntTSL 2 BASIC19.53■□□□□ 0.72
PPP4R3AQ6IN85 PRKN-209ENST00000612485 225 ntTSL 5 BASIC19.53■□□□□ 0.72
PPP4R3AQ6IN85 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
PPP4R3AQ6IN85 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
PPP4R3AQ6IN85 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PPP4R3AQ6IN85 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
PPP4R3AQ6IN85 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms