Protein–RNA interactions for Protein: Q00587

CDC42EP1, Cdc42 effector protein 1, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1Q00587 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDC42EP1Q00587 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDC42EP1Q00587 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CDC42EP1Q00587 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDC42EP1Q00587 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDC42EP1Q00587 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDC42EP1Q00587 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC18.68■□□□□ 0.58
CDC42EP1Q00587 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDC42EP1Q00587 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDC42EP1Q00587 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CDC42EP1Q00587 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
CDC42EP1Q00587 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CDC42EP1Q00587 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CDC42EP1Q00587 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDC42EP1Q00587 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDC42EP1Q00587 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CDC42EP1Q00587 AL021920.2-201ENST00000624828 1351 ntBASIC18.68■□□□□ 0.58
CDC42EP1Q00587 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.67■□□□□ 0.58
CDC42EP1Q00587 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CDC42EP1Q00587 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.67■□□□□ 0.58
CDC42EP1Q00587 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC18.67■□□□□ 0.58
CDC42EP1Q00587 NOC2LP2-201ENST00000407594 1944 ntBASIC18.67■□□□□ 0.58
CDC42EP1Q00587 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.67■□□□□ 0.58
CDC42EP1Q00587 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDC42EP1Q00587 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC18.67■□□□□ 0.58
CDC42EP1Q00587 GGCT-205ENST00000409436 954 ntTSL 3 BASIC18.67■□□□□ 0.58
CDC42EP1Q00587 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC18.67■□□□□ 0.58
CDC42EP1Q00587 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC18.67■□□□□ 0.58
CDC42EP1Q00587 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC18.67■□□□□ 0.58
CDC42EP1Q00587 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CDC42EP1Q00587 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDC42EP1Q00587 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC18.67■□□□□ 0.58
CDC42EP1Q00587 PUS1-205ENST00000535067 838 ntTSL 3 BASIC18.67■□□□□ 0.58
CDC42EP1Q00587 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC18.67■□□□□ 0.58
CDC42EP1Q00587 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDC42EP1Q00587 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDC42EP1Q00587 AC091167.2-201ENST00000579581 588 ntBASIC18.67■□□□□ 0.58
CDC42EP1Q00587 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CDC42EP1Q00587 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDC42EP1Q00587 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CDC42EP1Q00587 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDC42EP1Q00587 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
CDC42EP1Q00587 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDC42EP1Q00587 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDC42EP1Q00587 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDC42EP1Q00587 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDC42EP1Q00587 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC18.67■□□□□ 0.58
CDC42EP1Q00587 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDC42EP1Q00587 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CDC42EP1Q00587 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDC42EP1Q00587 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.66■□□□□ 0.58
CDC42EP1Q00587 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDC42EP1Q00587 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
CDC42EP1Q00587 HARS-203ENST00000431330 1774 ntTSL 2 BASIC18.66■□□□□ 0.58
CDC42EP1Q00587 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.66■□□□□ 0.58
CDC42EP1Q00587 AC012569.1-201ENST00000591191 1524 ntBASIC18.66■□□□□ 0.58
CDC42EP1Q00587 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.66■□□□□ 0.58
CDC42EP1Q00587 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CDC42EP1Q00587 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CDC42EP1Q00587 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CDC42EP1Q00587 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDC42EP1Q00587 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CDC42EP1Q00587 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CDC42EP1Q00587 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CDC42EP1Q00587 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC18.66■□□□□ 0.58
CDC42EP1Q00587 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CDC42EP1Q00587 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC18.66■□□□□ 0.58
CDC42EP1Q00587 AL596442.2-201ENST00000610240 980 ntBASIC18.66■□□□□ 0.58
CDC42EP1Q00587 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDC42EP1Q00587 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDC42EP1Q00587 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
CDC42EP1Q00587 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC18.66■□□□□ 0.58
CDC42EP1Q00587 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC18.66■□□□□ 0.58
CDC42EP1Q00587 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDC42EP1Q00587 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC18.66■□□□□ 0.58
CDC42EP1Q00587 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CDC42EP1Q00587 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDC42EP1Q00587 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC18.65■□□□□ 0.58
CDC42EP1Q00587 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CDC42EP1Q00587 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.65■□□□□ 0.58
CDC42EP1Q00587 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDC42EP1Q00587 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDC42EP1Q00587 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDC42EP1Q00587 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDC42EP1Q00587 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDC42EP1Q00587 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDC42EP1Q00587 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDC42EP1Q00587 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDC42EP1Q00587 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CDC42EP1Q00587 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDC42EP1Q00587 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC18.65■□□□□ 0.58
CDC42EP1Q00587 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
CDC42EP1Q00587 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDC42EP1Q00587 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC18.65■□□□□ 0.58
CDC42EP1Q00587 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC18.65■□□□□ 0.58
CDC42EP1Q00587 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC18.65■□□□□ 0.58
CDC42EP1Q00587 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC18.65■□□□□ 0.58
CDC42EP1Q00587 METTL23-205ENST00000588302 925 ntTSL 5 BASIC18.65■□□□□ 0.58
CDC42EP1Q00587 AL161645.1-201ENST00000622716 1255 ntBASIC18.65■□□□□ 0.58
CDC42EP1Q00587 AP001350.2-201ENST00000625104 1094 ntBASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms