Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
CDKL1Q00532 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.97■□□□□ 0.31
CDKL1Q00532 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CDKL1Q00532 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.97■□□□□ 0.31
CDKL1Q00532 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.97■□□□□ 0.31
CDKL1Q00532 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.97■□□□□ 0.31
CDKL1Q00532 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.97■□□□□ 0.31
CDKL1Q00532 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.97■□□□□ 0.31
CDKL1Q00532 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CDKL1Q00532 AC092119.3-201ENST00000612618 583 ntBASIC16.97■□□□□ 0.31
CDKL1Q00532 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.97■□□□□ 0.31
CDKL1Q00532 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
CDKL1Q00532 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.97■□□□□ 0.31
CDKL1Q00532 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.97■□□□□ 0.31
CDKL1Q00532 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CDKL1Q00532 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CDKL1Q00532 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.97■□□□□ 0.31
CDKL1Q00532 PMPCAP1-201ENST00000508114 1576 ntBASIC16.97■□□□□ 0.31
CDKL1Q00532 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CDKL1Q00532 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDKL1Q00532 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CDKL1Q00532 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CDKL1Q00532 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.97■□□□□ 0.31
CDKL1Q00532 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDKL1Q00532 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDKL1Q00532 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDKL1Q00532 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDKL1Q00532 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDKL1Q00532 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDKL1Q00532 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CDKL1Q00532 AC093525.9-201ENST00000624961 1746 ntBASIC16.96■□□□□ 0.31
CDKL1Q00532 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDKL1Q00532 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
CDKL1Q00532 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDKL1Q00532 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CDKL1Q00532 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CDKL1Q00532 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CDKL1Q00532 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDKL1Q00532 LINC02199-201ENST00000506655 2702 ntBASIC16.96■□□□□ 0.31
CDKL1Q00532 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.96■□□□□ 0.31
CDKL1Q00532 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CDKL1Q00532 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDKL1Q00532 KLF4P1-201ENST00000412782 1185 ntBASIC16.96■□□□□ 0.31
CDKL1Q00532 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDKL1Q00532 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDKL1Q00532 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CDKL1Q00532 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CDKL1Q00532 AC073592.5-201ENST00000624854 528 ntBASIC16.96■□□□□ 0.31
CDKL1Q00532 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CDKL1Q00532 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CDKL1Q00532 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CDKL1Q00532 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDKL1Q00532 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.96■□□□□ 0.31
CDKL1Q00532 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDKL1Q00532 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDKL1Q00532 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDKL1Q00532 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CDKL1Q00532 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDKL1Q00532 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDKL1Q00532 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
CDKL1Q00532 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CDKL1Q00532 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.96■□□□□ 0.3
CDKL1Q00532 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.95■□□□□ 0.3
CDKL1Q00532 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
CDKL1Q00532 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.95■□□□□ 0.3
CDKL1Q00532 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDKL1Q00532 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
CDKL1Q00532 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDKL1Q00532 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDKL1Q00532 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.95■□□□□ 0.3
CDKL1Q00532 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.95■□□□□ 0.3
CDKL1Q00532 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDKL1Q00532 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDKL1Q00532 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDKL1Q00532 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CDKL1Q00532 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDKL1Q00532 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CDKL1Q00532 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDKL1Q00532 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDKL1Q00532 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDKL1Q00532 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDKL1Q00532 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.95■□□□□ 0.3
CDKL1Q00532 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDKL1Q00532 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.95■□□□□ 0.3
CDKL1Q00532 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDKL1Q00532 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CDKL1Q00532 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
CDKL1Q00532 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.95■□□□□ 0.3
CDKL1Q00532 AP000867.4-201ENST00000641616 219 ntBASIC16.95■□□□□ 0.3
CDKL1Q00532 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDKL1Q00532 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.95■□□□□ 0.3
CDKL1Q00532 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDKL1Q00532 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDKL1Q00532 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDKL1Q00532 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.95■□□□□ 0.3
CDKL1Q00532 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
CDKL1Q00532 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.95■□□□□ 0.3
CDKL1Q00532 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.95■□□□□ 0.3
CDKL1Q00532 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CDKL1Q00532 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms