Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDK3Q00526 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CDK3Q00526 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDK3Q00526 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.87■□□□□ 0.29
CDK3Q00526 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.87■□□□□ 0.29
CDK3Q00526 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CDK3Q00526 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDK3Q00526 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.87■□□□□ 0.29
CDK3Q00526 FAM185BP-201ENST00000443595 716 ntBASIC16.87■□□□□ 0.29
CDK3Q00526 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.87■□□□□ 0.29
CDK3Q00526 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDK3Q00526 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.87■□□□□ 0.29
CDK3Q00526 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.87■□□□□ 0.29
CDK3Q00526 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.87■□□□□ 0.29
CDK3Q00526 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.87■□□□□ 0.29
CDK3Q00526 AC006538.3-201ENST00000612495 578 ntBASIC16.87■□□□□ 0.29
CDK3Q00526 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.87■□□□□ 0.29
CDK3Q00526 AL513190.1-201ENST00000621254 727 ntBASIC16.87■□□□□ 0.29
CDK3Q00526 AC004877.2-201ENST00000623941 599 ntBASIC16.87■□□□□ 0.29
CDK3Q00526 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.87■□□□□ 0.29
CDK3Q00526 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDK3Q00526 AC129492.6-201ENST00000611383 1305 ntBASIC16.87■□□□□ 0.29
CDK3Q00526 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDK3Q00526 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDK3Q00526 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.87■□□□□ 0.29
CDK3Q00526 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.87■□□□□ 0.29
CDK3Q00526 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDK3Q00526 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.87■□□□□ 0.29
CDK3Q00526 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CDK3Q00526 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDK3Q00526 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.86■□□□□ 0.29
CDK3Q00526 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDK3Q00526 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDK3Q00526 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDK3Q00526 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.86■□□□□ 0.29
CDK3Q00526 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CDK3Q00526 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDK3Q00526 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDK3Q00526 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDK3Q00526 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CDK3Q00526 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CDK3Q00526 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.86■□□□□ 0.29
CDK3Q00526 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.86■□□□□ 0.29
CDK3Q00526 DNAJB3-201ENST00000446806 729 ntBASIC16.86■□□□□ 0.29
CDK3Q00526 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.86■□□□□ 0.29
CDK3Q00526 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CDK3Q00526 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.86■□□□□ 0.29
CDK3Q00526 ACTL9-202ENST00000612068 1252 ntBASIC16.86■□□□□ 0.29
CDK3Q00526 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.86■□□□□ 0.29
CDK3Q00526 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.86■□□□□ 0.29
CDK3Q00526 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.86■□□□□ 0.29
CDK3Q00526 BCAR1-209ENST00000546196 1340 ntBASIC16.86■□□□□ 0.29
CDK3Q00526 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CDK3Q00526 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDK3Q00526 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDK3Q00526 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CDK3Q00526 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDK3Q00526 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
CDK3Q00526 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDK3Q00526 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CDK3Q00526 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CDK3Q00526 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDK3Q00526 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC16.86■□□□□ 0.29
CDK3Q00526 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDK3Q00526 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDK3Q00526 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.86■□□□□ 0.29
CDK3Q00526 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDK3Q00526 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDK3Q00526 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CDK3Q00526 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDK3Q00526 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDK3Q00526 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.85■□□□□ 0.29
CDK3Q00526 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CDK3Q00526 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDK3Q00526 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDK3Q00526 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
CDK3Q00526 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDK3Q00526 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.85■□□□□ 0.29
CDK3Q00526 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDK3Q00526 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDK3Q00526 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDK3Q00526 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
CDK3Q00526 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDK3Q00526 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDK3Q00526 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDK3Q00526 MIR1233-2-201ENST00000408138 82 ntBASIC16.85■□□□□ 0.29
CDK3Q00526 MIR1233-1-201ENST00000408722 82 ntBASIC16.85■□□□□ 0.29
CDK3Q00526 GPX1P2-201ENST00000429271 606 ntBASIC16.85■□□□□ 0.29
CDK3Q00526 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.85■□□□□ 0.29
CDK3Q00526 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CDK3Q00526 AC107918.2-201ENST00000530817 355 ntBASIC16.85■□□□□ 0.29
CDK3Q00526 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.85■□□□□ 0.29
CDK3Q00526 KRT19P2-202ENST00000557173 1012 ntBASIC16.85■□□□□ 0.29
CDK3Q00526 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDK3Q00526 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.85■□□□□ 0.29
CDK3Q00526 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDK3Q00526 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.85■□□□□ 0.29
CDK3Q00526 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
CDK3Q00526 AC010327.4-202ENST00000591484 748 ntBASIC16.85■□□□□ 0.29
CDK3Q00526 AC023141.13-201ENST00000604991 943 ntBASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms