Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.95■□□□□ 0.46
IRX4P78413 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.95■□□□□ 0.46
IRX4P78413 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.95■□□□□ 0.46
IRX4P78413 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.95■□□□□ 0.46
IRX4P78413 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.95■□□□□ 0.46
IRX4P78413 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.95■□□□□ 0.46
IRX4P78413 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.95■□□□□ 0.46
IRX4P78413 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.95■□□□□ 0.46
IRX4P78413 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.95■□□□□ 0.46
IRX4P78413 AC140113.2-201ENST00000604370 208 ntBASIC17.95■□□□□ 0.46
IRX4P78413 AL355385.1-201ENST00000606123 409 ntBASIC17.95■□□□□ 0.46
IRX4P78413 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.95■□□□□ 0.46
IRX4P78413 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
IRX4P78413 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
IRX4P78413 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
IRX4P78413 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
IRX4P78413 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
IRX4P78413 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
IRX4P78413 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.95■□□□□ 0.46
IRX4P78413 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
IRX4P78413 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
IRX4P78413 AC084018.2-201ENST00000613093 2607 ntBASIC17.95■□□□□ 0.46
IRX4P78413 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
IRX4P78413 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
IRX4P78413 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
IRX4P78413 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
IRX4P78413 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.95■□□□□ 0.46
IRX4P78413 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.94■□□□□ 0.46
IRX4P78413 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
IRX4P78413 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
IRX4P78413 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.94■□□□□ 0.46
IRX4P78413 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
IRX4P78413 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
IRX4P78413 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.94■□□□□ 0.46
IRX4P78413 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
IRX4P78413 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
IRX4P78413 AC100803.2-201ENST00000562459 1963 ntBASIC17.94■□□□□ 0.46
IRX4P78413 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
IRX4P78413 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
IRX4P78413 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
IRX4P78413 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.94■□□□□ 0.46
IRX4P78413 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
IRX4P78413 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
IRX4P78413 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.94■□□□□ 0.46
IRX4P78413 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.94■□□□□ 0.46
IRX4P78413 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.94■□□□□ 0.46
IRX4P78413 AC021087.4-201ENST00000563761 564 ntBASIC17.94■□□□□ 0.46
IRX4P78413 AC010327.4-202ENST00000591484 748 ntBASIC17.94■□□□□ 0.46
IRX4P78413 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.94■□□□□ 0.46
IRX4P78413 FAM197Y3-203ENST00000618346 717 ntBASIC17.94■□□□□ 0.46
IRX4P78413 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
IRX4P78413 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
IRX4P78413 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
IRX4P78413 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
IRX4P78413 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
IRX4P78413 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
IRX4P78413 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
IRX4P78413 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.94■□□□□ 0.46
IRX4P78413 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
IRX4P78413 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
IRX4P78413 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
IRX4P78413 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
IRX4P78413 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
IRX4P78413 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
IRX4P78413 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.94■□□□□ 0.46
IRX4P78413 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
IRX4P78413 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
IRX4P78413 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
IRX4P78413 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
IRX4P78413 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.94■□□□□ 0.46
IRX4P78413 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
IRX4P78413 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.94■□□□□ 0.46
IRX4P78413 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
IRX4P78413 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.94■□□□□ 0.46
IRX4P78413 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
IRX4P78413 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
IRX4P78413 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
IRX4P78413 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.93■□□□□ 0.46
IRX4P78413 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
IRX4P78413 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.93■□□□□ 0.46
IRX4P78413 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
IRX4P78413 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
IRX4P78413 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
IRX4P78413 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
IRX4P78413 AL024508.2-201ENST00000607749 1894 ntBASIC17.93■□□□□ 0.46
IRX4P78413 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
IRX4P78413 MED15P5-201ENST00000423150 992 ntBASIC17.93■□□□□ 0.46
IRX4P78413 PMS2P2-201ENST00000425039 1128 ntBASIC17.93■□□□□ 0.46
IRX4P78413 RPS8P6-201ENST00000426177 609 ntBASIC17.93■□□□□ 0.46
IRX4P78413 AC098831.1-202ENST00000438821 336 ntBASIC17.93■□□□□ 0.46
IRX4P78413 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
IRX4P78413 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.93■□□□□ 0.46
IRX4P78413 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.93■□□□□ 0.46
IRX4P78413 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.93■□□□□ 0.46
IRX4P78413 LINC02084-201ENST00000606069 1096 ntBASIC17.93■□□□□ 0.46
IRX4P78413 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
IRX4P78413 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
IRX4P78413 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
IRX4P78413 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
IRX4P78413 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms