Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.79■□□□□ 0.28
YBX1P67809 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.79■□□□□ 0.28
YBX1P67809 MRPL3P1-201ENST00000400109 1033 ntBASIC16.79■□□□□ 0.28
YBX1P67809 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.79■□□□□ 0.28
YBX1P67809 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.79■□□□□ 0.28
YBX1P67809 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.79■□□□□ 0.28
YBX1P67809 AC021087.4-201ENST00000563761 564 ntBASIC16.79■□□□□ 0.28
YBX1P67809 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.79■□□□□ 0.28
YBX1P67809 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.79■□□□□ 0.28
YBX1P67809 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
YBX1P67809 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.79■□□□□ 0.28
YBX1P67809 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.79■□□□□ 0.28
YBX1P67809 AC073592.4-201ENST00000623827 446 ntBASIC16.79■□□□□ 0.28
YBX1P67809 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.79■□□□□ 0.28
YBX1P67809 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
YBX1P67809 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
YBX1P67809 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.79■□□□□ 0.28
YBX1P67809 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
YBX1P67809 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
YBX1P67809 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
YBX1P67809 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
YBX1P67809 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
YBX1P67809 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
YBX1P67809 AC005915.1-201ENST00000624912 2018 ntBASIC16.79■□□□□ 0.28
YBX1P67809 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
YBX1P67809 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
YBX1P67809 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
YBX1P67809 SIGLEC16-201ENST00000599858 1437 ntBASIC16.79■□□□□ 0.28
YBX1P67809 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.78■□□□□ 0.28
YBX1P67809 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
YBX1P67809 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
YBX1P67809 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
YBX1P67809 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
YBX1P67809 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
YBX1P67809 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
YBX1P67809 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
YBX1P67809 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.78■□□□□ 0.28
YBX1P67809 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
YBX1P67809 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.78■□□□□ 0.28
YBX1P67809 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
YBX1P67809 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.78■□□□□ 0.28
YBX1P67809 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
YBX1P67809 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
YBX1P67809 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.78■□□□□ 0.28
YBX1P67809 AL020989.1-201ENST00000422979 469 ntBASIC16.78■□□□□ 0.28
YBX1P67809 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
YBX1P67809 HNRNPDP1-201ENST00000439535 754 ntBASIC16.78■□□□□ 0.28
YBX1P67809 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
YBX1P67809 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.78■□□□□ 0.28
YBX1P67809 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
YBX1P67809 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.78■□□□□ 0.28
YBX1P67809 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.78■□□□□ 0.28
YBX1P67809 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.78■□□□□ 0.28
YBX1P67809 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
YBX1P67809 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
YBX1P67809 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
YBX1P67809 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
YBX1P67809 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.78■□□□□ 0.28
YBX1P67809 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
YBX1P67809 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
YBX1P67809 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
YBX1P67809 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
YBX1P67809 AC092171.3-201ENST00000610122 2651 ntBASIC16.78■□□□□ 0.28
YBX1P67809 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
YBX1P67809 AL135999.2-201ENST00000622438 1686 ntBASIC16.78■□□□□ 0.28
YBX1P67809 AC116353.5-201ENST00000638148 1699 ntBASIC16.78■□□□□ 0.28
YBX1P67809 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
YBX1P67809 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
YBX1P67809 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
YBX1P67809 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
YBX1P67809 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
YBX1P67809 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.77■□□□□ 0.28
YBX1P67809 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.77■□□□□ 0.28
YBX1P67809 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.77■□□□□ 0.28
YBX1P67809 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
YBX1P67809 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.28
YBX1P67809 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
YBX1P67809 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
YBX1P67809 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
YBX1P67809 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
YBX1P67809 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.77■□□□□ 0.28
YBX1P67809 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.77■□□□□ 0.28
YBX1P67809 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
YBX1P67809 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
YBX1P67809 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
YBX1P67809 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.77■□□□□ 0.28
YBX1P67809 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC16.77■□□□□ 0.28
YBX1P67809 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
YBX1P67809 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
YBX1P67809 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
YBX1P67809 FAM197Y8-203ENST00000450145 560 ntBASIC16.77■□□□□ 0.28
YBX1P67809 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
YBX1P67809 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.77■□□□□ 0.28
YBX1P67809 AP002469.2-201ENST00000531724 424 ntBASIC16.77■□□□□ 0.28
YBX1P67809 AL160237.2-201ENST00000556165 472 ntBASIC16.77■□□□□ 0.28
YBX1P67809 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.77■□□□□ 0.28
YBX1P67809 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
YBX1P67809 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.77■□□□□ 0.28
YBX1P67809 AC064862.7-201ENST00000604520 867 ntBASIC16.77■□□□□ 0.28
YBX1P67809 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms