Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 AC148477.8-201ENST00000624298 468 ntBASIC18.67■□□□□ 0.58
SNRPFP62306 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
SNRPFP62306 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.67■□□□□ 0.58
SNRPFP62306 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC18.67■□□□□ 0.58
SNRPFP62306 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNRPFP62306 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SNRPFP62306 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNRPFP62306 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.67■□□□□ 0.58
SNRPFP62306 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SNRPFP62306 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC18.67■□□□□ 0.58
SNRPFP62306 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
SNRPFP62306 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNRPFP62306 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNRPFP62306 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SNRPFP62306 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.66■□□□□ 0.58
SNRPFP62306 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.66■□□□□ 0.58
SNRPFP62306 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNRPFP62306 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SNRPFP62306 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
SNRPFP62306 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNRPFP62306 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNRPFP62306 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.66■□□□□ 0.58
SNRPFP62306 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.66■□□□□ 0.58
SNRPFP62306 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNRPFP62306 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.66■□□□□ 0.58
SNRPFP62306 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.66■□□□□ 0.58
SNRPFP62306 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
SNRPFP62306 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.66■□□□□ 0.58
SNRPFP62306 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.66■□□□□ 0.58
SNRPFP62306 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.66■□□□□ 0.58
SNRPFP62306 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.66■□□□□ 0.58
SNRPFP62306 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNRPFP62306 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SNRPFP62306 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.66■□□□□ 0.58
SNRPFP62306 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNRPFP62306 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNRPFP62306 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
SNRPFP62306 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC18.66■□□□□ 0.58
SNRPFP62306 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC18.66■□□□□ 0.58
SNRPFP62306 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SNRPFP62306 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SNRPFP62306 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNRPFP62306 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SNRPFP62306 PI4KAP1-204ENST00000612579 1703 ntBASIC18.66■□□□□ 0.58
SNRPFP62306 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNRPFP62306 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.66■□□□□ 0.58
SNRPFP62306 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNRPFP62306 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
SNRPFP62306 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNRPFP62306 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18.65■□□□□ 0.58
SNRPFP62306 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
SNRPFP62306 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNRPFP62306 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SNRPFP62306 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNRPFP62306 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNRPFP62306 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNRPFP62306 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNRPFP62306 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SNRPFP62306 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.65■□□□□ 0.58
SNRPFP62306 AC093909.1-201ENST00000504731 1122 ntBASIC18.65■□□□□ 0.58
SNRPFP62306 IGHV3-65-201ENST00000523210 341 ntBASIC18.65■□□□□ 0.58
SNRPFP62306 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.65■□□□□ 0.58
SNRPFP62306 SLC25A6P4-201ENST00000586535 553 ntBASIC18.65■□□□□ 0.58
SNRPFP62306 AC005593.1-201ENST00000624894 515 ntBASIC18.65■□□□□ 0.58
SNRPFP62306 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC18.65■□□□□ 0.58
SNRPFP62306 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNRPFP62306 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SNRPFP62306 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.65■□□□□ 0.58
SNRPFP62306 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNRPFP62306 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SNRPFP62306 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
SNRPFP62306 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SNRPFP62306 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNRPFP62306 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNRPFP62306 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.65■□□□□ 0.58
SNRPFP62306 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
SNRPFP62306 KRT8P49-201ENST00000604166 1432 ntBASIC18.65■□□□□ 0.58
SNRPFP62306 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNRPFP62306 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNRPFP62306 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
SNRPFP62306 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
SNRPFP62306 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC18.64■□□□□ 0.57
SNRPFP62306 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.64■□□□□ 0.57
SNRPFP62306 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
SNRPFP62306 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SNRPFP62306 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SNRPFP62306 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
SNRPFP62306 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18.64■□□□□ 0.57
SNRPFP62306 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNRPFP62306 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.64■□□□□ 0.57
SNRPFP62306 RNA5SP419-201ENST00000515908 135 ntBASIC18.64■□□□□ 0.57
SNRPFP62306 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.64■□□□□ 0.57
SNRPFP62306 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.64■□□□□ 0.57
SNRPFP62306 AC012640.2-201ENST00000561606 901 ntBASIC18.64■□□□□ 0.57
SNRPFP62306 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.64■□□□□ 0.57
SNRPFP62306 AP001005.1-201ENST00000571755 1248 ntBASIC18.64■□□□□ 0.57
SNRPFP62306 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.64■□□□□ 0.57
SNRPFP62306 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.64■□□□□ 0.57
SNRPFP62306 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SNRPFP62306 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms