Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.31■□□□□ 0.36
AP1S1P61966 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.31■□□□□ 0.36
AP1S1P61966 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP1S1P61966 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.31■□□□□ 0.36
AP1S1P61966 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.31■□□□□ 0.36
AP1S1P61966 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
AP1S1P61966 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.31■□□□□ 0.36
AP1S1P61966 AL645608.8-201ENST00000606034 2086 ntBASIC17.31■□□□□ 0.36
AP1S1P61966 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
AP1S1P61966 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.31■□□□□ 0.36
AP1S1P61966 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
AP1S1P61966 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.31■□□□□ 0.36
AP1S1P61966 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.31■□□□□ 0.36
AP1S1P61966 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP1S1P61966 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
AP1S1P61966 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP1S1P61966 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
AP1S1P61966 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
AP1S1P61966 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
AP1S1P61966 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP1S1P61966 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.3■□□□□ 0.36
AP1S1P61966 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.3■□□□□ 0.36
AP1S1P61966 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
AP1S1P61966 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.3■□□□□ 0.36
AP1S1P61966 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP1S1P61966 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.3■□□□□ 0.36
AP1S1P61966 AC009947.1-201ENST00000444350 727 ntBASIC17.3■□□□□ 0.36
AP1S1P61966 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.3■□□□□ 0.36
AP1S1P61966 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.3■□□□□ 0.36
AP1S1P61966 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.3■□□□□ 0.36
AP1S1P61966 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.3■□□□□ 0.36
AP1S1P61966 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.3■□□□□ 0.36
AP1S1P61966 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
AP1S1P61966 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP1S1P61966 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP1S1P61966 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP1S1P61966 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.3■□□□□ 0.36
AP1S1P61966 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.3■□□□□ 0.36
AP1S1P61966 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.3■□□□□ 0.36
AP1S1P61966 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP1S1P61966 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.3■□□□□ 0.36
AP1S1P61966 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP1S1P61966 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP1S1P61966 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP1S1P61966 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP1S1P61966 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
AP1S1P61966 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
AP1S1P61966 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
AP1S1P61966 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
AP1S1P61966 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
AP1S1P61966 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
AP1S1P61966 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP1S1P61966 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
AP1S1P61966 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.29■□□□□ 0.36
AP1S1P61966 MRPL20P1-201ENST00000400819 433 ntBASIC17.29■□□□□ 0.36
AP1S1P61966 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP1S1P61966 RPL13AP23-201ENST00000480739 586 ntBASIC17.29■□□□□ 0.36
AP1S1P61966 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.29■□□□□ 0.36
AP1S1P61966 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP1S1P61966 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.29■□□□□ 0.36
AP1S1P61966 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.29■□□□□ 0.36
AP1S1P61966 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.29■□□□□ 0.36
AP1S1P61966 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.29■□□□□ 0.36
AP1S1P61966 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP1S1P61966 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP1S1P61966 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP1S1P61966 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
AP1S1P61966 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP1S1P61966 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.29■□□□□ 0.36
AP1S1P61966 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
AP1S1P61966 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
AP1S1P61966 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
AP1S1P61966 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP1S1P61966 AC104109.2-201ENST00000602919 1418 ntBASIC17.29■□□□□ 0.36
AP1S1P61966 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP1S1P61966 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
AP1S1P61966 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.28■□□□□ 0.36
AP1S1P61966 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP1S1P61966 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP1S1P61966 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP1S1P61966 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP1S1P61966 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
AP1S1P61966 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
AP1S1P61966 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
AP1S1P61966 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP1S1P61966 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP1S1P61966 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP1S1P61966 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.28■□□□□ 0.36
AP1S1P61966 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP1S1P61966 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP1S1P61966 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.28■□□□□ 0.36
AP1S1P61966 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.28■□□□□ 0.36
AP1S1P61966 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.28■□□□□ 0.36
AP1S1P61966 PRSS29P-201ENST00000440800 595 ntBASIC17.28■□□□□ 0.36
AP1S1P61966 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
AP1S1P61966 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.28■□□□□ 0.36
AP1S1P61966 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.28■□□□□ 0.36
AP1S1P61966 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
AP1S1P61966 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.28■□□□□ 0.36
AP1S1P61966 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms