Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
CLDN20P56880 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
CLDN20P56880 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC15.83■□□□□ 0.12
CLDN20P56880 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN20P56880 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN20P56880 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC15.83■□□□□ 0.12
CLDN20P56880 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.83■□□□□ 0.12
CLDN20P56880 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC15.83■□□□□ 0.12
CLDN20P56880 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN20P56880 PMPCAP1-201ENST00000508114 1576 ntBASIC15.83■□□□□ 0.12
CLDN20P56880 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN20P56880 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC15.83■□□□□ 0.12
CLDN20P56880 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN20P56880 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.82■□□□□ 0.12
CLDN20P56880 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN20P56880 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN20P56880 AL596257.1-201ENST00000641463 2694 ntBASIC15.82■□□□□ 0.12
CLDN20P56880 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC15.82■□□□□ 0.12
CLDN20P56880 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CLDN20P56880 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN20P56880 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN20P56880 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC15.82■□□□□ 0.12
CLDN20P56880 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN20P56880 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN20P56880 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
CLDN20P56880 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CLDN20P56880 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN20P56880 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN20P56880 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.82■□□□□ 0.12
CLDN20P56880 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN20P56880 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN20P56880 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN20P56880 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN20P56880 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN20P56880 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
CLDN20P56880 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CLDN20P56880 AC009078.2-202ENST00000463353 338 ntBASIC15.82■□□□□ 0.12
CLDN20P56880 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15.82■□□□□ 0.12
CLDN20P56880 AP002469.2-201ENST00000531724 424 ntBASIC15.82■□□□□ 0.12
CLDN20P56880 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN20P56880 IRF8-202ENST00000562492 946 ntTSL 3 BASIC15.82■□□□□ 0.12
CLDN20P56880 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC15.82■□□□□ 0.12
CLDN20P56880 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.82■□□□□ 0.12
CLDN20P56880 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN20P56880 KLK8-205ENST00000593490 267 ntTSL 3 BASIC15.82■□□□□ 0.12
CLDN20P56880 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN20P56880 VPS51-217ENST00000639871 243 ntTSL 5 BASIC15.82■□□□□ 0.12
CLDN20P56880 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC15.82■□□□□ 0.12
CLDN20P56880 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN20P56880 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN20P56880 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC15.82■□□□□ 0.12
CLDN20P56880 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.82■□□□□ 0.12
CLDN20P56880 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC15.82■□□□□ 0.12
CLDN20P56880 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN20P56880 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN20P56880 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN20P56880 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CLDN20P56880 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CLDN20P56880 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN20P56880 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN20P56880 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC15.82■□□□□ 0.12
CLDN20P56880 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN20P56880 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CLDN20P56880 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC15.81■□□□□ 0.12
CLDN20P56880 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN20P56880 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN20P56880 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CLDN20P56880 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC15.81■□□□□ 0.12
CLDN20P56880 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN20P56880 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN20P56880 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN20P56880 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC15.81■□□□□ 0.12
CLDN20P56880 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN20P56880 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN20P56880 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN20P56880 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.81■□□□□ 0.12
CLDN20P56880 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN20P56880 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN20P56880 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN20P56880 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN20P56880 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.81■□□□□ 0.12
CLDN20P56880 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.81■□□□□ 0.12
CLDN20P56880 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC15.81■□□□□ 0.12
CLDN20P56880 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CLDN20P56880 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN20P56880 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.81■□□□□ 0.12
CLDN20P56880 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.81■□□□□ 0.12
CLDN20P56880 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
CLDN20P56880 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.81■□□□□ 0.12
CLDN20P56880 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN20P56880 AL353593.2-201ENST00000602529 1483 ntBASIC15.81■□□□□ 0.12
CLDN20P56880 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
CLDN20P56880 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC15.81■□□□□ 0.12
CLDN20P56880 AC073592.5-201ENST00000624854 528 ntBASIC15.81■□□□□ 0.12
CLDN20P56880 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC15.81■□□□□ 0.12
CLDN20P56880 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CLDN20P56880 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN20P56880 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN20P56880 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN20P56880 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms