Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC15.82■□□□□ 0.12
CDH11P55287 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC15.82■□□□□ 0.12
CDH11P55287 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDH11P55287 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC15.82■□□□□ 0.12
CDH11P55287 GPR32P1-201ENST00000601788 811 ntBASIC15.82■□□□□ 0.12
CDH11P55287 AL390719.2-201ENST00000606993 987 ntBASIC15.82■□□□□ 0.12
CDH11P55287 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH11P55287 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC15.82■□□□□ 0.12
CDH11P55287 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
CDH11P55287 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDH11P55287 VPS72-207ENST00000640458 689 ntTSL 5 BASIC15.82■□□□□ 0.12
CDH11P55287 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH11P55287 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDH11P55287 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC15.82■□□□□ 0.12
CDH11P55287 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CDH11P55287 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.82■□□□□ 0.12
CDH11P55287 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.82■□□□□ 0.12
CDH11P55287 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH11P55287 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH11P55287 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH11P55287 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH11P55287 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH11P55287 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH11P55287 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH11P55287 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC15.82■□□□□ 0.12
CDH11P55287 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH11P55287 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH11P55287 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH11P55287 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH11P55287 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDH11P55287 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDH11P55287 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDH11P55287 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDH11P55287 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.81■□□□□ 0.12
CDH11P55287 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDH11P55287 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDH11P55287 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDH11P55287 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDH11P55287 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CDH11P55287 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CDH11P55287 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDH11P55287 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CDH11P55287 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDH11P55287 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDH11P55287 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CDH11P55287 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDH11P55287 HES2-202ENST00000377836 507 ntTSL 2 BASIC15.81■□□□□ 0.12
CDH11P55287 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CDH11P55287 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CDH11P55287 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CDH11P55287 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
CDH11P55287 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDH11P55287 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC15.81■□□□□ 0.12
CDH11P55287 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC15.81■□□□□ 0.12
CDH11P55287 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC15.81■□□□□ 0.12
CDH11P55287 TPM4P1-201ENST00000436100 807 ntBASIC15.81■□□□□ 0.12
CDH11P55287 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
CDH11P55287 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CDH11P55287 AP000867.3-201ENST00000524675 377 ntBASIC15.81■□□□□ 0.12
CDH11P55287 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC15.81■□□□□ 0.12
CDH11P55287 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC15.81■□□□□ 0.12
CDH11P55287 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC15.81■□□□□ 0.12
CDH11P55287 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CDH11P55287 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
CDH11P55287 TEN1-204ENST00000588202 862 ntTSL 3 BASIC15.81■□□□□ 0.12
CDH11P55287 TK1-205ENST00000590862 642 ntTSL 3 BASIC15.81■□□□□ 0.12
CDH11P55287 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
CDH11P55287 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.81■□□□□ 0.12
CDH11P55287 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CDH11P55287 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CDH11P55287 AC005915.1-201ENST00000624912 2018 ntBASIC15.81■□□□□ 0.12
CDH11P55287 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDH11P55287 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CDH11P55287 FLJ38576-201ENST00000623820 2459 ntBASIC15.8■□□□□ 0.12
CDH11P55287 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDH11P55287 KRT89P-201ENST00000620027 1478 ntBASIC15.8■□□□□ 0.12
CDH11P55287 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDH11P55287 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CDH11P55287 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CDH11P55287 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDH11P55287 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDH11P55287 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDH11P55287 IGHGP-201ENST00000390555 1178 ntBASIC15.8■□□□□ 0.12
CDH11P55287 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC15.8■□□□□ 0.12
CDH11P55287 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC15.8■□□□□ 0.12
CDH11P55287 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDH11P55287 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC15.8■□□□□ 0.12
CDH11P55287 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC15.8■□□□□ 0.12
CDH11P55287 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDH11P55287 CIB2-208ENST00000560618 804 ntTSL 2 BASIC15.8■□□□□ 0.12
CDH11P55287 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CDH11P55287 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC15.8■□□□□ 0.12
CDH11P55287 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDH11P55287 IGHV3-41-201ENST00000613121 348 ntBASIC15.8■□□□□ 0.12
CDH11P55287 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDH11P55287 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDH11P55287 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
CDH11P55287 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.8■□□□□ 0.12
CDH11P55287 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CDH11P55287 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms