Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH8P55286 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDH8P55286 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.35■□□□□ 0.53
CDH8P55286 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.35■□□□□ 0.53
CDH8P55286 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.35■□□□□ 0.53
CDH8P55286 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
CDH8P55286 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.35■□□□□ 0.53
CDH8P55286 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.35■□□□□ 0.53
CDH8P55286 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.35■□□□□ 0.53
CDH8P55286 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
CDH8P55286 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.35■□□□□ 0.53
CDH8P55286 AL805961.1-202ENST00000641562 540 ntBASIC18.35■□□□□ 0.53
CDH8P55286 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CDH8P55286 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDH8P55286 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CDH8P55286 AP001094.4-201ENST00000579008 2176 ntBASIC18.35■□□□□ 0.53
CDH8P55286 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CDH8P55286 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH8P55286 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.35■□□□□ 0.53
CDH8P55286 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CDH8P55286 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CDH8P55286 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CDH8P55286 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDH8P55286 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH8P55286 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH8P55286 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH8P55286 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDH8P55286 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CDH8P55286 LINC02012-201ENST00000608206 1725 ntBASIC18.35■□□□□ 0.53
CDH8P55286 PI4KAP1-204ENST00000612579 1703 ntBASIC18.35■□□□□ 0.53
CDH8P55286 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CDH8P55286 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH8P55286 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CDH8P55286 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.34■□□□□ 0.53
CDH8P55286 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH8P55286 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDH8P55286 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC18.34■□□□□ 0.53
CDH8P55286 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CDH8P55286 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH8P55286 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH8P55286 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.34■□□□□ 0.53
CDH8P55286 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH8P55286 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH8P55286 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC18.34■□□□□ 0.53
CDH8P55286 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.34■□□□□ 0.53
CDH8P55286 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.34■□□□□ 0.53
CDH8P55286 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.34■□□□□ 0.53
CDH8P55286 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.34■□□□□ 0.53
CDH8P55286 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CDH8P55286 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDH8P55286 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH8P55286 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDH8P55286 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.34■□□□□ 0.53
CDH8P55286 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CDH8P55286 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.34■□□□□ 0.53
CDH8P55286 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH8P55286 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDH8P55286 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDH8P55286 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDH8P55286 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
CDH8P55286 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CDH8P55286 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CDH8P55286 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
CDH8P55286 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDH8P55286 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
CDH8P55286 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDH8P55286 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC18.33■□□□□ 0.53
CDH8P55286 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CDH8P55286 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.33■□□□□ 0.53
CDH8P55286 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDH8P55286 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDH8P55286 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDH8P55286 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDH8P55286 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18.33■□□□□ 0.52
CDH8P55286 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDH8P55286 AP002414.1-201ENST00000391405 1147 ntBASIC18.33■□□□□ 0.52
CDH8P55286 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC18.33■□□□□ 0.52
CDH8P55286 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CDH8P55286 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.33■□□□□ 0.52
CDH8P55286 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.33■□□□□ 0.52
CDH8P55286 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC18.33■□□□□ 0.52
CDH8P55286 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.33■□□□□ 0.52
CDH8P55286 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.33■□□□□ 0.52
CDH8P55286 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.33■□□□□ 0.52
CDH8P55286 IGHV3-65-201ENST00000523210 341 ntBASIC18.33■□□□□ 0.52
CDH8P55286 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.33■□□□□ 0.52
CDH8P55286 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.33■□□□□ 0.52
CDH8P55286 TERC-201ENST00000602385 541 ntBASIC18.33■□□□□ 0.52
CDH8P55286 AC008667.4-201ENST00000607370 168 ntBASIC18.33■□□□□ 0.52
CDH8P55286 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC18.33■□□□□ 0.52
CDH8P55286 AF228730.7-201ENST00000641842 219 ntBASIC18.33■□□□□ 0.52
CDH8P55286 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.33■□□□□ 0.52
CDH8P55286 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDH8P55286 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDH8P55286 AC080080.1-201ENST00000625121 2420 ntBASIC18.33■□□□□ 0.52
CDH8P55286 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
CDH8P55286 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDH8P55286 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDH8P55286 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.33■□□□□ 0.52
CDH8P55286 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms