Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
ATP1B3P54709 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
ATP1B3P54709 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ATP1B3P54709 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC14.99□□□□□ -0.01
ATP1B3P54709 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ATP1B3P54709 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ATP1B3P54709 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
ATP1B3P54709 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ATP1B3P54709 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ATP1B3P54709 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
ATP1B3P54709 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
ATP1B3P54709 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ATP1B3P54709 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
ATP1B3P54709 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
ATP1B3P54709 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ATP1B3P54709 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ATP1B3P54709 MED25-212ENST00000618715 1467 ntTSL 5 BASIC14.98□□□□□ -0.01
ATP1B3P54709 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ATP1B3P54709 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
ATP1B3P54709 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC14.98□□□□□ -0.01
ATP1B3P54709 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ATP1B3P54709 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
ATP1B3P54709 AC007967.3-201ENST00000434308 558 ntBASIC14.98□□□□□ -0.01
ATP1B3P54709 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC14.98□□□□□ -0.01
ATP1B3P54709 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
ATP1B3P54709 DUX4L26-201ENST00000489078 1255 ntBASIC14.98□□□□□ -0.01
ATP1B3P54709 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC14.98□□□□□ -0.01
ATP1B3P54709 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC14.98□□□□□ -0.01
ATP1B3P54709 LTBR-211ENST00000543190 785 ntTSL 3 BASIC14.98□□□□□ -0.01
ATP1B3P54709 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC14.98□□□□□ -0.01
ATP1B3P54709 AC111152.3-201ENST00000569699 673 ntBASIC14.98□□□□□ -0.01
ATP1B3P54709 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
ATP1B3P54709 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ATP1B3P54709 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC14.98□□□□□ -0.01
ATP1B3P54709 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC14.98□□□□□ -0.01
ATP1B3P54709 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
ATP1B3P54709 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
ATP1B3P54709 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ATP1B3P54709 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ATP1B3P54709 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ATP1B3P54709 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ATP1B3P54709 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ATP1B3P54709 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC14.98□□□□□ -0.01
ATP1B3P54709 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ATP1B3P54709 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.98□□□□□ -0.01
ATP1B3P54709 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ATP1B3P54709 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ATP1B3P54709 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ATP1B3P54709 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ATP1B3P54709 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.97□□□□□ -0.01
ATP1B3P54709 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ATP1B3P54709 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ATP1B3P54709 AC116353.5-201ENST00000638148 1699 ntBASIC14.97□□□□□ -0.01
ATP1B3P54709 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ATP1B3P54709 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC14.97□□□□□ -0.01
ATP1B3P54709 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.97□□□□□ -0.01
ATP1B3P54709 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC14.97□□□□□ -0.01
ATP1B3P54709 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
ATP1B3P54709 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
ATP1B3P54709 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ATP1B3P54709 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
ATP1B3P54709 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ATP1B3P54709 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ATP1B3P54709 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC14.97□□□□□ -0.01
ATP1B3P54709 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC14.97□□□□□ -0.01
ATP1B3P54709 RN7SL606P-201ENST00000472779 293 ntBASIC14.97□□□□□ -0.01
ATP1B3P54709 AC109462.3-201ENST00000573934 613 ntBASIC14.97□□□□□ -0.01
ATP1B3P54709 RN7SL850P-201ENST00000579959 291 ntBASIC14.97□□□□□ -0.01
ATP1B3P54709 TK1-204ENST00000590430 683 ntTSL 3 BASIC14.97□□□□□ -0.01
ATP1B3P54709 AL592071.1-201ENST00000611956 408 ntBASIC14.97□□□□□ -0.01
ATP1B3P54709 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC14.97□□□□□ -0.01
ATP1B3P54709 VPS72-207ENST00000640458 689 ntTSL 5 BASIC14.97□□□□□ -0.01
ATP1B3P54709 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC14.97□□□□□ -0.01
ATP1B3P54709 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ATP1B3P54709 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ATP1B3P54709 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC14.97□□□□□ -0.01
ATP1B3P54709 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ATP1B3P54709 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ATP1B3P54709 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
ATP1B3P54709 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ATP1B3P54709 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
ATP1B3P54709 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
ATP1B3P54709 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ATP1B3P54709 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ATP1B3P54709 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
ATP1B3P54709 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
ATP1B3P54709 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ATP1B3P54709 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ATP1B3P54709 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ATP1B3P54709 LINC02199-201ENST00000506655 2702 ntBASIC14.96□□□□□ -0.01
ATP1B3P54709 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ATP1B3P54709 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC14.96□□□□□ -0.01
ATP1B3P54709 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC14.96□□□□□ -0.01
ATP1B3P54709 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ATP1B3P54709 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
ATP1B3P54709 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ATP1B3P54709 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ATP1B3P54709 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
ATP1B3P54709 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ATP1B3P54709 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms