Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC19.4■□□□□ 0.7
USP11P51784 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP11P51784 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
USP11P51784 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
USP11P51784 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC19.4■□□□□ 0.7
USP11P51784 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP11P51784 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP11P51784 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
USP11P51784 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP11P51784 VN2R19P-201ENST00000442399 1052 ntBASIC19.4■□□□□ 0.7
USP11P51784 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
USP11P51784 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC19.4■□□□□ 0.7
USP11P51784 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP11P51784 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
USP11P51784 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
USP11P51784 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC19.4■□□□□ 0.7
USP11P51784 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP11P51784 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP11P51784 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP11P51784 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
USP11P51784 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC19.39■□□□□ 0.7
USP11P51784 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
USP11P51784 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
USP11P51784 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
USP11P51784 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
USP11P51784 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP11P51784 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP11P51784 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP11P51784 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC19.39■□□□□ 0.69
USP11P51784 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
USP11P51784 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC19.39■□□□□ 0.69
USP11P51784 CRYGEP-201ENST00000412192 528 ntBASIC19.39■□□□□ 0.69
USP11P51784 ATP6V0CP3-201ENST00000417255 467 ntBASIC19.39■□□□□ 0.69
USP11P51784 AP000347.1-202ENST00000435868 847 ntBASIC19.39■□□□□ 0.69
USP11P51784 SLC25A6P2-201ENST00000497974 877 ntBASIC19.39■□□□□ 0.69
USP11P51784 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC19.39■□□□□ 0.69
USP11P51784 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC19.39■□□□□ 0.69
USP11P51784 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
USP11P51784 CAND2-206ENST00000626378 333 ntTSL 5 BASIC19.39■□□□□ 0.69
USP11P51784 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC19.39■□□□□ 0.69
USP11P51784 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
USP11P51784 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
USP11P51784 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
USP11P51784 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC19.39■□□□□ 0.69
USP11P51784 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
USP11P51784 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP11P51784 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
USP11P51784 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC19.39■□□□□ 0.69
USP11P51784 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP11P51784 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP11P51784 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC19.39■□□□□ 0.69
USP11P51784 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP11P51784 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
USP11P51784 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
USP11P51784 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
USP11P51784 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
USP11P51784 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP11P51784 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP11P51784 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP11P51784 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
USP11P51784 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP11P51784 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP11P51784 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP11P51784 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP11P51784 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP11P51784 MIR574-201ENST00000385209 96 ntBASIC19.38■□□□□ 0.69
USP11P51784 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC19.38■□□□□ 0.69
USP11P51784 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC19.38■□□□□ 0.69
USP11P51784 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
USP11P51784 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC19.38■□□□□ 0.69
USP11P51784 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC19.38■□□□□ 0.69
USP11P51784 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC19.38■□□□□ 0.69
USP11P51784 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC19.38■□□□□ 0.69
USP11P51784 DUX4L17-201ENST00000557360 1267 ntBASIC19.38■□□□□ 0.69
USP11P51784 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
USP11P51784 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
USP11P51784 AC092053.1-201ENST00000605787 1936 ntBASIC19.38■□□□□ 0.69
USP11P51784 AC129492.6-201ENST00000611383 1305 ntBASIC19.38■□□□□ 0.69
USP11P51784 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
USP11P51784 AC002310.6-201ENST00000624451 1377 ntBASIC19.38■□□□□ 0.69
USP11P51784 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
USP11P51784 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP11P51784 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP11P51784 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
USP11P51784 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP11P51784 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
USP11P51784 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
USP11P51784 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
USP11P51784 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
USP11P51784 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
USP11P51784 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
USP11P51784 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.37■□□□□ 0.69
USP11P51784 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC19.37■□□□□ 0.69
USP11P51784 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
USP11P51784 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC19.37■□□□□ 0.69
USP11P51784 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
USP11P51784 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
USP11P51784 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
USP11P51784 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
USP11P51784 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms