Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 AC004706.3-202ENST00000621574 984 ntBASIC16.58■□□□□ 0.24
SLC6A12P48065 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC6A12P48065 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.58■□□□□ 0.24
SLC6A12P48065 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SLC6A12P48065 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SLC6A12P48065 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC6A12P48065 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC6A12P48065 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC6A12P48065 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
SLC6A12P48065 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC6A12P48065 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC6A12P48065 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
SLC6A12P48065 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
SLC6A12P48065 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC6A12P48065 RNF216P1-203ENST00000404404 2427 ntBASIC16.57■□□□□ 0.24
SLC6A12P48065 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.57■□□□□ 0.24
SLC6A12P48065 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
SLC6A12P48065 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC6A12P48065 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
SLC6A12P48065 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC6A12P48065 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.57■□□□□ 0.24
SLC6A12P48065 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.57■□□□□ 0.24
SLC6A12P48065 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.57■□□□□ 0.24
SLC6A12P48065 AC243591.1-201ENST00000452967 1364 ntBASIC16.57■□□□□ 0.24
SLC6A12P48065 TUBB8P12-201ENST00000308911 1335 ntBASIC16.57■□□□□ 0.24
SLC6A12P48065 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SLC6A12P48065 TUBB7P-202ENST00000428444 1305 ntBASIC16.57■□□□□ 0.24
SLC6A12P48065 TUBB8P7-204ENST00000567960 1332 ntBASIC16.57■□□□□ 0.24
SLC6A12P48065 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC6A12P48065 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC6A12P48065 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC6A12P48065 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.57■□□□□ 0.24
SLC6A12P48065 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SLC6A12P48065 DUSP5P1-201ENST00000441325 1139 ntBASIC16.57■□□□□ 0.24
SLC6A12P48065 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.57■□□□□ 0.24
SLC6A12P48065 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.57■□□□□ 0.24
SLC6A12P48065 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.57■□□□□ 0.24
SLC6A12P48065 CBFB-203ENST00000561924 584 ntTSL 5 BASIC16.57■□□□□ 0.24
SLC6A12P48065 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.57■□□□□ 0.24
SLC6A12P48065 AC021087.4-201ENST00000563761 564 ntBASIC16.57■□□□□ 0.24
SLC6A12P48065 TERC-201ENST00000602385 541 ntBASIC16.57■□□□□ 0.24
SLC6A12P48065 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
SLC6A12P48065 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SLC6A12P48065 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC6A12P48065 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.57■□□□□ 0.24
SLC6A12P48065 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC6A12P48065 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SLC6A12P48065 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC6A12P48065 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SLC6A12P48065 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC6A12P48065 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
SLC6A12P48065 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.57■□□□□ 0.24
SLC6A12P48065 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SLC6A12P48065 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC6A12P48065 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SLC6A12P48065 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC6A12P48065 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
SLC6A12P48065 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
SLC6A12P48065 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC6A12P48065 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC6A12P48065 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SLC6A12P48065 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.56■□□□□ 0.24
SLC6A12P48065 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC6A12P48065 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.56■□□□□ 0.24
SLC6A12P48065 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC6A12P48065 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SLC6A12P48065 FLJ38576-201ENST00000623820 2459 ntBASIC16.56■□□□□ 0.24
SLC6A12P48065 PCDHB17P-201ENST00000539533 2393 ntBASIC16.56■□□□□ 0.24
SLC6A12P48065 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.56■□□□□ 0.24
SLC6A12P48065 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC6A12P48065 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC6A12P48065 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC6A12P48065 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
SLC6A12P48065 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC6A12P48065 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC6A12P48065 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC6A12P48065 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC6A12P48065 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC6A12P48065 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.56■□□□□ 0.24
SLC6A12P48065 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC6A12P48065 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.56■□□□□ 0.24
SLC6A12P48065 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.56■□□□□ 0.24
SLC6A12P48065 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.56■□□□□ 0.24
SLC6A12P48065 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC6A12P48065 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
SLC6A12P48065 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.56■□□□□ 0.24
SLC6A12P48065 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.56■□□□□ 0.24
SLC6A12P48065 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SLC6A12P48065 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SLC6A12P48065 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC6A12P48065 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.56■□□□□ 0.24
SLC6A12P48065 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SLC6A12P48065 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
SLC6A12P48065 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC6A12P48065 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
SLC6A12P48065 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.56■□□□□ 0.24
SLC6A12P48065 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC6A12P48065 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.56■□□□□ 0.24
SLC6A12P48065 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.55■□□□□ 0.24
SLC6A12P48065 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms