Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
GDF1P27539 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.61■□□□□ 0.09
GDF1P27539 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
GDF1P27539 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
GDF1P27539 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.61■□□□□ 0.09
GDF1P27539 KRT18P13-201ENST00000400056 1290 ntBASIC15.61■□□□□ 0.09
GDF1P27539 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
GDF1P27539 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.61■□□□□ 0.09
GDF1P27539 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.61■□□□□ 0.09
GDF1P27539 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.61■□□□□ 0.09
GDF1P27539 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.61■□□□□ 0.09
GDF1P27539 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.61■□□□□ 0.09
GDF1P27539 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
GDF1P27539 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.61■□□□□ 0.09
GDF1P27539 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
GDF1P27539 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.61■□□□□ 0.09
GDF1P27539 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
GDF1P27539 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.61■□□□□ 0.09
GDF1P27539 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC15.61■□□□□ 0.09
GDF1P27539 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
GDF1P27539 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
GDF1P27539 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC15.61■□□□□ 0.09
GDF1P27539 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
GDF1P27539 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.61■□□□□ 0.09
GDF1P27539 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
GDF1P27539 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
GDF1P27539 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
GDF1P27539 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
GDF1P27539 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC15.6■□□□□ 0.09
GDF1P27539 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
GDF1P27539 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
GDF1P27539 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
GDF1P27539 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
GDF1P27539 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
GDF1P27539 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
GDF1P27539 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
GDF1P27539 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.6■□□□□ 0.09
GDF1P27539 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
GDF1P27539 BX842568.4-201ENST00000421222 227 ntBASIC15.6■□□□□ 0.09
GDF1P27539 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
GDF1P27539 PRSS29P-201ENST00000440800 595 ntBASIC15.6■□□□□ 0.09
GDF1P27539 VN2R19P-201ENST00000442399 1052 ntBASIC15.6■□□□□ 0.09
GDF1P27539 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.6■□□□□ 0.09
GDF1P27539 NMU-202ENST00000505262 693 ntTSL 3 BASIC15.6■□□□□ 0.09
GDF1P27539 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.6■□□□□ 0.09
GDF1P27539 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC15.6■□□□□ 0.09
GDF1P27539 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
GDF1P27539 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.6■□□□□ 0.09
GDF1P27539 AC010654.1-201ENST00000615722 808 ntBASIC15.6■□□□□ 0.09
GDF1P27539 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.6■□□□□ 0.09
GDF1P27539 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
GDF1P27539 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
GDF1P27539 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
GDF1P27539 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
GDF1P27539 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
GDF1P27539 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
GDF1P27539 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
GDF1P27539 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
GDF1P27539 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
GDF1P27539 AL133373.2-201ENST00000623187 2828 ntBASIC15.59■□□□□ 0.09
GDF1P27539 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.59■□□□□ 0.09
GDF1P27539 AC068880.1-201ENST00000507289 2297 ntBASIC15.59■□□□□ 0.09
GDF1P27539 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
GDF1P27539 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
GDF1P27539 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.59■□□□□ 0.09
GDF1P27539 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
GDF1P27539 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.59■□□□□ 0.09
GDF1P27539 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.59■□□□□ 0.09
GDF1P27539 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.59■□□□□ 0.09
GDF1P27539 AC040169.1-201ENST00000565382 521 ntBASIC15.59■□□□□ 0.09
GDF1P27539 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
GDF1P27539 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.59■□□□□ 0.09
GDF1P27539 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.59■□□□□ 0.09
GDF1P27539 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
GDF1P27539 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
GDF1P27539 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC15.59■□□□□ 0.09
GDF1P27539 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
GDF1P27539 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
GDF1P27539 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
GDF1P27539 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
GDF1P27539 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.59■□□□□ 0.09
GDF1P27539 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
GDF1P27539 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
GDF1P27539 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
GDF1P27539 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
GDF1P27539 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.58■□□□□ 0.08
GDF1P27539 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
GDF1P27539 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
GDF1P27539 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC15.58■□□□□ 0.08
GDF1P27539 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
GDF1P27539 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
GDF1P27539 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
GDF1P27539 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.58■□□□□ 0.08
GDF1P27539 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
GDF1P27539 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.58■□□□□ 0.08
GDF1P27539 PGAM5P1-201ENST00000518923 814 ntBASIC15.58■□□□□ 0.08
GDF1P27539 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.58■□□□□ 0.08
GDF1P27539 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC15.58■□□□□ 0.08
GDF1P27539 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.58■□□□□ 0.08
GDF1P27539 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms