Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCND1P24385 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CCND1P24385 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.39■□□□□ 0.38
CCND1P24385 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCND1P24385 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.39■□□□□ 0.37
CCND1P24385 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCND1P24385 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCND1P24385 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCND1P24385 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCND1P24385 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.39■□□□□ 0.37
CCND1P24385 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCND1P24385 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCND1P24385 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCND1P24385 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCND1P24385 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCND1P24385 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CCND1P24385 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCND1P24385 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCND1P24385 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.39■□□□□ 0.37
CCND1P24385 GUSBP12-201ENST00000513727 720 ntBASIC17.39■□□□□ 0.37
CCND1P24385 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.39■□□□□ 0.37
CCND1P24385 RNF126P1-202ENST00000569893 925 ntBASIC17.39■□□□□ 0.37
CCND1P24385 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.39■□□□□ 0.37
CCND1P24385 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.39■□□□□ 0.37
CCND1P24385 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.39■□□□□ 0.37
CCND1P24385 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCND1P24385 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCND1P24385 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCND1P24385 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCND1P24385 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCND1P24385 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
CCND1P24385 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCND1P24385 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.39■□□□□ 0.37
CCND1P24385 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCND1P24385 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCND1P24385 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCND1P24385 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.39■□□□□ 0.37
CCND1P24385 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.38■□□□□ 0.37
CCND1P24385 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCND1P24385 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCND1P24385 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCND1P24385 AC006449.5-201ENST00000610658 2098 ntBASIC17.38■□□□□ 0.37
CCND1P24385 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCND1P24385 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CCND1P24385 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCND1P24385 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCND1P24385 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CCND1P24385 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCND1P24385 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCND1P24385 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCND1P24385 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCND1P24385 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCND1P24385 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCND1P24385 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCND1P24385 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.38■□□□□ 0.37
CCND1P24385 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.38■□□□□ 0.37
CCND1P24385 TSPY22P-201ENST00000427496 604 ntBASIC17.38■□□□□ 0.37
CCND1P24385 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCND1P24385 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCND1P24385 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.38■□□□□ 0.37
CCND1P24385 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.38■□□□□ 0.37
CCND1P24385 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.38■□□□□ 0.37
CCND1P24385 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCND1P24385 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCND1P24385 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCND1P24385 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.38■□□□□ 0.37
CCND1P24385 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCND1P24385 AC005332.1-201ENST00000577698 1310 ntBASIC17.38■□□□□ 0.37
CCND1P24385 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCND1P24385 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCND1P24385 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCND1P24385 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC17.38■□□□□ 0.37
CCND1P24385 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.38■□□□□ 0.37
CCND1P24385 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCND1P24385 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.38■□□□□ 0.37
CCND1P24385 AC105917.1-201ENST00000506637 2539 ntBASIC17.38■□□□□ 0.37
CCND1P24385 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC17.38■□□□□ 0.37
CCND1P24385 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCND1P24385 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCND1P24385 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.37■□□□□ 0.37
CCND1P24385 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCND1P24385 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCND1P24385 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.37■□□□□ 0.37
CCND1P24385 AC132872.4-202ENST00000622924 2756 ntBASIC17.37■□□□□ 0.37
CCND1P24385 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC17.37■□□□□ 0.37
CCND1P24385 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCND1P24385 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.37■□□□□ 0.37
CCND1P24385 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCND1P24385 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CCND1P24385 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCND1P24385 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.37■□□□□ 0.37
CCND1P24385 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCND1P24385 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CCND1P24385 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.37■□□□□ 0.37
CCND1P24385 FAM86EP-206ENST00000510506 987 ntBASIC17.37■□□□□ 0.37
CCND1P24385 KRT8P26-201ENST00000534154 1276 ntBASIC17.37■□□□□ 0.37
CCND1P24385 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.37■□□□□ 0.37
CCND1P24385 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.37■□□□□ 0.37
CCND1P24385 AC090616.6-201ENST00000582640 721 ntBASIC17.37■□□□□ 0.37
CCND1P24385 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms