Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 AC025062.2-201ENST00000605477 670 ntBASIC18.08■□□□□ 0.48
MMP8P22894 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.08■□□□□ 0.48
MMP8P22894 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
MMP8P22894 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
MMP8P22894 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
MMP8P22894 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
MMP8P22894 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
MMP8P22894 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MMP8P22894 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
MMP8P22894 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
MMP8P22894 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.07■□□□□ 0.48
MMP8P22894 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MMP8P22894 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.07■□□□□ 0.48
MMP8P22894 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.07■□□□□ 0.48
MMP8P22894 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
MMP8P22894 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
MMP8P22894 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.07■□□□□ 0.48
MMP8P22894 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.07■□□□□ 0.48
MMP8P22894 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
MMP8P22894 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.07■□□□□ 0.48
MMP8P22894 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.07■□□□□ 0.48
MMP8P22894 AC139887.3-201ENST00000568585 713 ntBASIC18.07■□□□□ 0.48
MMP8P22894 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MMP8P22894 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MMP8P22894 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MMP8P22894 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
MMP8P22894 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
MMP8P22894 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
MMP8P22894 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MMP8P22894 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
MMP8P22894 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
MMP8P22894 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MMP8P22894 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MMP8P22894 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MMP8P22894 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.06■□□□□ 0.48
MMP8P22894 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
MMP8P22894 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC18.06■□□□□ 0.48
MMP8P22894 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
MMP8P22894 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MMP8P22894 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
MMP8P22894 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
MMP8P22894 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.06■□□□□ 0.48
MMP8P22894 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
MMP8P22894 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MMP8P22894 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MMP8P22894 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MMP8P22894 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
MMP8P22894 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.06■□□□□ 0.48
MMP8P22894 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.06■□□□□ 0.48
MMP8P22894 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.06■□□□□ 0.48
MMP8P22894 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
MMP8P22894 AC004706.3-202ENST00000621574 984 ntBASIC18.06■□□□□ 0.48
MMP8P22894 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MMP8P22894 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
MMP8P22894 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC18.06■□□□□ 0.48
MMP8P22894 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MMP8P22894 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC18.06■□□□□ 0.48
MMP8P22894 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
MMP8P22894 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
MMP8P22894 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
MMP8P22894 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MMP8P22894 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.06■□□□□ 0.48
MMP8P22894 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC18.06■□□□□ 0.48
MMP8P22894 RNF216P1-203ENST00000404404 2427 ntBASIC18.06■□□□□ 0.48
MMP8P22894 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
MMP8P22894 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MMP8P22894 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MMP8P22894 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
MMP8P22894 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
MMP8P22894 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MMP8P22894 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
MMP8P22894 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
MMP8P22894 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MMP8P22894 AC078925.2-201ENST00000624013 1973 ntBASIC18.05■□□□□ 0.48
MMP8P22894 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.05■□□□□ 0.48
MMP8P22894 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.05■□□□□ 0.48
MMP8P22894 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
MMP8P22894 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.05■□□□□ 0.48
MMP8P22894 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.05■□□□□ 0.48
MMP8P22894 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
MMP8P22894 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.05■□□□□ 0.48
MMP8P22894 TERC-201ENST00000602385 541 ntBASIC18.05■□□□□ 0.48
MMP8P22894 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.05■□□□□ 0.48
MMP8P22894 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
MMP8P22894 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MMP8P22894 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
MMP8P22894 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
MMP8P22894 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MMP8P22894 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
MMP8P22894 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MMP8P22894 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MMP8P22894 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MMP8P22894 FLJ38576-201ENST00000623820 2459 ntBASIC18.05■□□□□ 0.48
MMP8P22894 AC243591.1-201ENST00000452967 1364 ntBASIC18.04■□□□□ 0.48
MMP8P22894 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC18.04■□□□□ 0.48
MMP8P22894 PCDHB17P-201ENST00000539533 2393 ntBASIC18.04■□□□□ 0.48
MMP8P22894 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MMP8P22894 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MMP8P22894 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.04■□□□□ 0.48
MMP8P22894 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms