Protein–RNA interactions for Protein: P20248

CCNA2, Cyclin-A2, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA2P20248 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCNA2P20248 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
CCNA2P20248 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCNA2P20248 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCNA2P20248 AC092850.2-201ENST00000623821 2697 ntBASIC16.31■□□□□ 0.2
CCNA2P20248 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCNA2P20248 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCNA2P20248 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCNA2P20248 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCNA2P20248 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.31■□□□□ 0.2
CCNA2P20248 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCNA2P20248 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCNA2P20248 SPDYE13P-201ENST00000445314 798 ntBASIC16.31■□□□□ 0.2
CCNA2P20248 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.31■□□□□ 0.2
CCNA2P20248 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.31■□□□□ 0.2
CCNA2P20248 AC113404.2-201ENST00000507884 177 ntBASIC16.31■□□□□ 0.2
CCNA2P20248 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.31■□□□□ 0.2
CCNA2P20248 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCNA2P20248 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.31■□□□□ 0.2
CCNA2P20248 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCNA2P20248 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCNA2P20248 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCNA2P20248 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCNA2P20248 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCNA2P20248 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCNA2P20248 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCNA2P20248 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCNA2P20248 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
CCNA2P20248 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.3■□□□□ 0.2
CCNA2P20248 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCNA2P20248 Z83836.1-201ENST00000624605 1642 ntBASIC16.3■□□□□ 0.2
CCNA2P20248 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCNA2P20248 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
CCNA2P20248 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCNA2P20248 KRT89P-201ENST00000620027 1478 ntBASIC16.3■□□□□ 0.2
CCNA2P20248 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCNA2P20248 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.3■□□□□ 0.2
CCNA2P20248 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.3■□□□□ 0.2
CCNA2P20248 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.3■□□□□ 0.2
CCNA2P20248 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCNA2P20248 AL353692.3-201ENST00000407031 1396 ntBASIC16.3■□□□□ 0.2
CCNA2P20248 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCNA2P20248 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.3■□□□□ 0.2
CCNA2P20248 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.3■□□□□ 0.2
CCNA2P20248 AC022898.2-201ENST00000616822 1312 ntBASIC16.3■□□□□ 0.2
CCNA2P20248 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.3■□□□□ 0.2
CCNA2P20248 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCNA2P20248 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCNA2P20248 IGHGP-201ENST00000390555 1178 ntBASIC16.3■□□□□ 0.2
CCNA2P20248 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.3■□□□□ 0.2
CCNA2P20248 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.3■□□□□ 0.2
CCNA2P20248 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.3■□□□□ 0.2
CCNA2P20248 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.3■□□□□ 0.2
CCNA2P20248 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.3■□□□□ 0.2
CCNA2P20248 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.3■□□□□ 0.2
CCNA2P20248 AC087388.1-201ENST00000571370 1112 ntBASIC16.3■□□□□ 0.2
CCNA2P20248 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.3■□□□□ 0.2
CCNA2P20248 GPR32P1-201ENST00000601788 811 ntBASIC16.3■□□□□ 0.2
CCNA2P20248 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCNA2P20248 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCNA2P20248 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.3■□□□□ 0.2
CCNA2P20248 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CCNA2P20248 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCNA2P20248 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCNA2P20248 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCNA2P20248 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCNA2P20248 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCNA2P20248 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCNA2P20248 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CCNA2P20248 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.3■□□□□ 0.2
CCNA2P20248 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCNA2P20248 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.3■□□□□ 0.2
CCNA2P20248 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.29■□□□□ 0.2
CCNA2P20248 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCNA2P20248 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CCNA2P20248 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CCNA2P20248 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCNA2P20248 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.29■□□□□ 0.2
CCNA2P20248 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCNA2P20248 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCNA2P20248 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CCNA2P20248 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.29■□□□□ 0.2
CCNA2P20248 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCNA2P20248 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCNA2P20248 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCNA2P20248 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCNA2P20248 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCNA2P20248 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCNA2P20248 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCNA2P20248 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.29■□□□□ 0.2
CCNA2P20248 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCNA2P20248 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCNA2P20248 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCNA2P20248 AL645929.1-201ENST00000420084 975 ntBASIC16.29■□□□□ 0.2
CCNA2P20248 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCNA2P20248 DUTP2-201ENST00000519164 463 ntBASIC16.29■□□□□ 0.2
CCNA2P20248 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.29■□□□□ 0.2
CCNA2P20248 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.29■□□□□ 0.2
CCNA2P20248 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.29■□□□□ 0.2
CCNA2P20248 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms