Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PRKCAP17252 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
PRKCAP17252 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.01■□□□□ 0.15
PRKCAP17252 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
PRKCAP17252 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PRKCAP17252 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.01■□□□□ 0.15
PRKCAP17252 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PRKCAP17252 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PRKCAP17252 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16■□□□□ 0.15
PRKCAP17252 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PRKCAP17252 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PRKCAP17252 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16■□□□□ 0.15
PRKCAP17252 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PRKCAP17252 PCDHB19P-201ENST00000570871 2371 ntBASIC16■□□□□ 0.15
PRKCAP17252 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PRKCAP17252 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16■□□□□ 0.15
PRKCAP17252 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
PRKCAP17252 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PRKCAP17252 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PRKCAP17252 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16■□□□□ 0.15
PRKCAP17252 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
PRKCAP17252 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16■□□□□ 0.15
PRKCAP17252 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PRKCAP17252 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16■□□□□ 0.15
PRKCAP17252 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16■□□□□ 0.15
PRKCAP17252 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
PRKCAP17252 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16■□□□□ 0.15
PRKCAP17252 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
PRKCAP17252 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
PRKCAP17252 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16■□□□□ 0.15
PRKCAP17252 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16■□□□□ 0.15
PRKCAP17252 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16■□□□□ 0.15
PRKCAP17252 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PRKCAP17252 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16■□□□□ 0.15
PRKCAP17252 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16■□□□□ 0.15
PRKCAP17252 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16■□□□□ 0.15
PRKCAP17252 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16■□□□□ 0.15
PRKCAP17252 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
PRKCAP17252 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16■□□□□ 0.15
PRKCAP17252 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PRKCAP17252 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16■□□□□ 0.15
PRKCAP17252 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
PRKCAP17252 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16■□□□□ 0.15
PRKCAP17252 CROCCP1-201ENST00000426910 5675 ntBASIC16■□□□□ 0.15
PRKCAP17252 INTS4P1-201ENST00000438455 1935 ntBASIC16■□□□□ 0.15
PRKCAP17252 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PRKCAP17252 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.99■□□□□ 0.15
PRKCAP17252 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PRKCAP17252 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PRKCAP17252 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
PRKCAP17252 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PRKCAP17252 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PRKCAP17252 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PRKCAP17252 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PRKCAP17252 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15.99■□□□□ 0.15
PRKCAP17252 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.99■□□□□ 0.15
PRKCAP17252 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PRKCAP17252 RCN1P2-201ENST00000398357 915 ntBASIC15.99■□□□□ 0.15
PRKCAP17252 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PRKCAP17252 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
PRKCAP17252 AC103564.2-201ENST00000432853 1299 ntBASIC15.99■□□□□ 0.15
PRKCAP17252 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC15.99■□□□□ 0.15
PRKCAP17252 NUS1P1-201ENST00000446295 882 ntBASIC15.99■□□□□ 0.15
PRKCAP17252 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15.99■□□□□ 0.15
PRKCAP17252 AC002558.1-201ENST00000488906 803 ntBASIC15.99■□□□□ 0.15
PRKCAP17252 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC15.99■□□□□ 0.15
PRKCAP17252 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC15.99■□□□□ 0.15
PRKCAP17252 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC15.99■□□□□ 0.15
PRKCAP17252 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC15.99■□□□□ 0.15
PRKCAP17252 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PRKCAP17252 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PRKCAP17252 AC138894.3-201ENST00000603787 634 ntBASIC15.99■□□□□ 0.15
PRKCAP17252 AC019129.2-201ENST00000609837 1235 ntBASIC15.99■□□□□ 0.15
PRKCAP17252 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC15.99■□□□□ 0.15
PRKCAP17252 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
PRKCAP17252 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PRKCAP17252 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PRKCAP17252 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PRKCAP17252 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.99■□□□□ 0.15
PRKCAP17252 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PRKCAP17252 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC15.99■□□□□ 0.15
PRKCAP17252 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.99■□□□□ 0.15
PRKCAP17252 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PRKCAP17252 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
PRKCAP17252 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PRKCAP17252 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PRKCAP17252 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PRKCAP17252 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PRKCAP17252 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PRKCAP17252 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PRKCAP17252 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
PRKCAP17252 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PRKCAP17252 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PRKCAP17252 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
PRKCAP17252 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
PRKCAP17252 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PRKCAP17252 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PRKCAP17252 CTNS-203ENST00000399306 803 ntTSL 3 BASIC15.98■□□□□ 0.15
PRKCAP17252 NUS1P2-201ENST00000417358 873 ntBASIC15.98■□□□□ 0.15
PRKCAP17252 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms