Protein–RNA interactions for Protein: P07498

CSN3, Kappa-casein, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSN3P07498 AC099336.1-202ENST00000602961 463 ntBASIC13.62□□□□□ -0.23
CSN3P07498 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSN3P07498 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
CSN3P07498 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC13.62□□□□□ -0.23
CSN3P07498 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
CSN3P07498 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSN3P07498 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC13.62□□□□□ -0.23
CSN3P07498 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSN3P07498 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSN3P07498 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSN3P07498 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSN3P07498 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC13.62□□□□□ -0.23
CSN3P07498 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CSN3P07498 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC13.62□□□□□ -0.23
CSN3P07498 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CSN3P07498 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSN3P07498 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CSN3P07498 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSN3P07498 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC13.62□□□□□ -0.23
CSN3P07498 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSN3P07498 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CSN3P07498 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC13.62□□□□□ -0.23
CSN3P07498 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC13.61□□□□□ -0.23
CSN3P07498 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CSN3P07498 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CSN3P07498 BANP-227ENST00000626016 2144 ntTSL 2 BASIC13.61□□□□□ -0.23
CSN3P07498 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC13.61□□□□□ -0.23
CSN3P07498 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CSN3P07498 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC13.61□□□□□ -0.23
CSN3P07498 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CSN3P07498 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CSN3P07498 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC13.61□□□□□ -0.23
CSN3P07498 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CSN3P07498 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CSN3P07498 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CSN3P07498 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CSN3P07498 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
CSN3P07498 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CSN3P07498 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC13.61□□□□□ -0.23
CSN3P07498 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CSN3P07498 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CSN3P07498 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CSN3P07498 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC13.61□□□□□ -0.23
CSN3P07498 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CSN3P07498 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC13.61□□□□□ -0.23
CSN3P07498 FOSL1P1-201ENST00000511041 816 ntBASIC13.61□□□□□ -0.23
CSN3P07498 SDHD-206ENST00000528182 754 ntTSL 3 BASIC13.61□□□□□ -0.23
CSN3P07498 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC13.61□□□□□ -0.23
CSN3P07498 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC13.61□□□□□ -0.23
CSN3P07498 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC13.61□□□□□ -0.23
CSN3P07498 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CSN3P07498 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC13.61□□□□□ -0.23
CSN3P07498 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC13.61□□□□□ -0.23
CSN3P07498 AC005336.2-201ENST00000593183 939 ntBASIC13.61□□□□□ -0.23
CSN3P07498 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CSN3P07498 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CSN3P07498 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CSN3P07498 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CSN3P07498 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CSN3P07498 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CSN3P07498 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC13.61□□□□□ -0.23
CSN3P07498 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
CSN3P07498 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC13.61□□□□□ -0.23
CSN3P07498 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC13.6□□□□□ -0.23
CSN3P07498 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CSN3P07498 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CSN3P07498 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CSN3P07498 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC13.6□□□□□ -0.23
CSN3P07498 PP12613-201ENST00000424958 2230 ntBASIC13.6□□□□□ -0.23
CSN3P07498 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CSN3P07498 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
CSN3P07498 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
CSN3P07498 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CSN3P07498 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CSN3P07498 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CSN3P07498 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CSN3P07498 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CSN3P07498 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC13.6□□□□□ -0.23
CSN3P07498 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CSN3P07498 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CSN3P07498 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
CSN3P07498 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CSN3P07498 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CSN3P07498 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CSN3P07498 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
CSN3P07498 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CSN3P07498 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CSN3P07498 AL450487.1-201ENST00000426799 995 ntBASIC13.6□□□□□ -0.23
CSN3P07498 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC13.6□□□□□ -0.23
CSN3P07498 BET1L-206ENST00000486280 665 ntTSL 3 BASIC13.6□□□□□ -0.23
CSN3P07498 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC13.6□□□□□ -0.23
CSN3P07498 UBALD1-205ENST00000590891 2641 ntBASIC13.6□□□□□ -0.23
CSN3P07498 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CSN3P07498 AC138894.3-201ENST00000603787 634 ntBASIC13.6□□□□□ -0.23
CSN3P07498 AL121772.3-201ENST00000610840 674 ntBASIC13.6□□□□□ -0.23
CSN3P07498 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
CSN3P07498 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CSN3P07498 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CSN3P07498 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CSN3P07498 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms