Protein–RNA interactions for Protein: P04628

WNT1, Proto-oncogene Wnt-1, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT1P04628 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
WNT1P04628 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.83■□□□□ 0.28
WNT1P04628 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.83■□□□□ 0.28
WNT1P04628 AL671277.1-201ENST00000429656 993 ntBASIC16.83■□□□□ 0.28
WNT1P04628 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.83■□□□□ 0.28
WNT1P04628 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
WNT1P04628 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.83■□□□□ 0.28
WNT1P04628 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
WNT1P04628 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
WNT1P04628 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.83■□□□□ 0.28
WNT1P04628 SPCS2P1-201ENST00000561636 679 ntBASIC16.83■□□□□ 0.28
WNT1P04628 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.83■□□□□ 0.28
WNT1P04628 AC092364.2-202ENST00000597012 1073 ntBASIC16.83■□□□□ 0.28
WNT1P04628 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
WNT1P04628 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
WNT1P04628 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
WNT1P04628 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
WNT1P04628 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
WNT1P04628 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.83■□□□□ 0.28
WNT1P04628 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
WNT1P04628 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
WNT1P04628 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
WNT1P04628 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
WNT1P04628 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
WNT1P04628 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.82■□□□□ 0.28
WNT1P04628 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
WNT1P04628 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
WNT1P04628 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
WNT1P04628 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
WNT1P04628 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
WNT1P04628 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
WNT1P04628 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.82■□□□□ 0.28
WNT1P04628 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
WNT1P04628 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
WNT1P04628 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
WNT1P04628 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
WNT1P04628 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
WNT1P04628 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
WNT1P04628 CALY-203ENST00000368558 825 ntTSL 5 BASIC16.82■□□□□ 0.28
WNT1P04628 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
WNT1P04628 AL627223.1-201ENST00000416693 442 ntBASIC16.82■□□□□ 0.28
WNT1P04628 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.82■□□□□ 0.28
WNT1P04628 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.82■□□□□ 0.28
WNT1P04628 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.82■□□□□ 0.28
WNT1P04628 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
WNT1P04628 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.82■□□□□ 0.28
WNT1P04628 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
WNT1P04628 AC011467.4-201ENST00000594891 528 ntBASIC16.82■□□□□ 0.28
WNT1P04628 AL645728.2-201ENST00000641974 660 ntBASIC16.82■□□□□ 0.28
WNT1P04628 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
WNT1P04628 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
WNT1P04628 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
WNT1P04628 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.82■□□□□ 0.28
WNT1P04628 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
WNT1P04628 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
WNT1P04628 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.82■□□□□ 0.28
WNT1P04628 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
WNT1P04628 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.82■□□□□ 0.28
WNT1P04628 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
WNT1P04628 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
WNT1P04628 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
WNT1P04628 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
WNT1P04628 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
WNT1P04628 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
WNT1P04628 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
WNT1P04628 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
WNT1P04628 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
WNT1P04628 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
WNT1P04628 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
WNT1P04628 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
WNT1P04628 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
WNT1P04628 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
WNT1P04628 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
WNT1P04628 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
WNT1P04628 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.81■□□□□ 0.28
WNT1P04628 AC025678.2-201ENST00000562061 970 ntBASIC16.81■□□□□ 0.28
WNT1P04628 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.81■□□□□ 0.28
WNT1P04628 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.81■□□□□ 0.28
WNT1P04628 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.81■□□□□ 0.28
WNT1P04628 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
WNT1P04628 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
WNT1P04628 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.81■□□□□ 0.28
WNT1P04628 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
WNT1P04628 AC020916.1-201ENST00000587762 1774 ntBASIC16.81■□□□□ 0.28
WNT1P04628 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
WNT1P04628 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.81■□□□□ 0.28
WNT1P04628 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
WNT1P04628 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
WNT1P04628 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.81■□□□□ 0.28
WNT1P04628 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
WNT1P04628 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
WNT1P04628 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.81■□□□□ 0.28
WNT1P04628 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
WNT1P04628 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
WNT1P04628 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
WNT1P04628 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
WNT1P04628 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
WNT1P04628 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
WNT1P04628 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
WNT1P04628 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms