Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 AC012640.2-201ENST00000561606 901 ntBASIC13.32□□□□□ -0.28
TRBV12-3P01733 AC139887.3-201ENST00000568585 713 ntBASIC13.32□□□□□ -0.28
TRBV12-3P01733 AL773604.1-201ENST00000617417 272 ntBASIC13.32□□□□□ -0.28
TRBV12-3P01733 AL589182.2-201ENST00000619332 1049 ntBASIC13.32□□□□□ -0.28
TRBV12-3P01733 FAM215A-202ENST00000632077 792 ntBASIC13.32□□□□□ -0.28
TRBV12-3P01733 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC13.32□□□□□ -0.28
TRBV12-3P01733 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRBV12-3P01733 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRBV12-3P01733 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
TRBV12-3P01733 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRBV12-3P01733 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRBV12-3P01733 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRBV12-3P01733 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRBV12-3P01733 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRBV12-3P01733 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC13.32□□□□□ -0.28
TRBV12-3P01733 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRBV12-3P01733 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
TRBV12-3P01733 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
TRBV12-3P01733 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRBV12-3P01733 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC13.31□□□□□ -0.28
TRBV12-3P01733 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRBV12-3P01733 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
TRBV12-3P01733 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRBV12-3P01733 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRBV12-3P01733 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRBV12-3P01733 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
TRBV12-3P01733 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRBV12-3P01733 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC13.31□□□□□ -0.28
TRBV12-3P01733 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRBV12-3P01733 AP001094.4-201ENST00000579008 2176 ntBASIC13.31□□□□□ -0.28
TRBV12-3P01733 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRBV12-3P01733 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRBV12-3P01733 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC13.31□□□□□ -0.28
TRBV12-3P01733 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRBV12-3P01733 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRBV12-3P01733 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
TRBV12-3P01733 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRBV12-3P01733 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRBV12-3P01733 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRBV12-3P01733 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC13.31□□□□□ -0.28
TRBV12-3P01733 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRBV12-3P01733 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC13.31□□□□□ -0.28
TRBV12-3P01733 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRBV12-3P01733 ELK2BP-201ENST00000415014 1224 ntBASIC13.31□□□□□ -0.28
TRBV12-3P01733 AL031284.1-201ENST00000419297 478 ntBASIC13.31□□□□□ -0.28
TRBV12-3P01733 AC026396.1-201ENST00000419388 421 ntBASIC13.31□□□□□ -0.28
TRBV12-3P01733 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC13.31□□□□□ -0.28
TRBV12-3P01733 LAGE3P1-201ENST00000425356 484 ntBASIC13.31□□□□□ -0.28
TRBV12-3P01733 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC13.31□□□□□ -0.28
TRBV12-3P01733 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC13.31□□□□□ -0.28
TRBV12-3P01733 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC13.31□□□□□ -0.28
TRBV12-3P01733 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC13.31□□□□□ -0.28
TRBV12-3P01733 AL353135.1-201ENST00000606729 504 ntBASIC13.31□□□□□ -0.28
TRBV12-3P01733 AL139424.1-201ENST00000607572 797 ntBASIC13.31□□□□□ -0.28
TRBV12-3P01733 MIR7706-201ENST00000613747 67 ntBASIC13.31□□□□□ -0.28
TRBV12-3P01733 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC13.31□□□□□ -0.28
TRBV12-3P01733 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC13.31□□□□□ -0.28
TRBV12-3P01733 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRBV12-3P01733 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
TRBV12-3P01733 AC006504.4-201ENST00000592118 1568 ntBASIC13.31□□□□□ -0.28
TRBV12-3P01733 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
TRBV12-3P01733 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
TRBV12-3P01733 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRBV12-3P01733 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC13.31□□□□□ -0.28
TRBV12-3P01733 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRBV12-3P01733 AC092053.1-201ENST00000605787 1936 ntBASIC13.31□□□□□ -0.28
TRBV12-3P01733 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRBV12-3P01733 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC13.31□□□□□ -0.28
TRBV12-3P01733 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC13.31□□□□□ -0.28
TRBV12-3P01733 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRBV12-3P01733 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRBV12-3P01733 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC13.31□□□□□ -0.28
TRBV12-3P01733 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRBV12-3P01733 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
TRBV12-3P01733 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRBV12-3P01733 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
TRBV12-3P01733 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC13.3□□□□□ -0.28
TRBV12-3P01733 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRBV12-3P01733 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
TRBV12-3P01733 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC13.3□□□□□ -0.28
TRBV12-3P01733 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
TRBV12-3P01733 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRBV12-3P01733 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRBV12-3P01733 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRBV12-3P01733 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRBV12-3P01733 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRBV12-3P01733 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRBV12-3P01733 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
TRBV12-3P01733 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRBV12-3P01733 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRBV12-3P01733 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRBV12-3P01733 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRBV12-3P01733 CENPM-204ENST00000402420 688 ntTSL 5 BASIC13.3□□□□□ -0.28
TRBV12-3P01733 RNA5SP419-201ENST00000515908 135 ntBASIC13.3□□□□□ -0.28
TRBV12-3P01733 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC13.3□□□□□ -0.28
TRBV12-3P01733 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC13.3□□□□□ -0.28
TRBV12-3P01733 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRBV12-3P01733 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRBV12-3P01733 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC13.3□□□□□ -0.28
TRBV12-3P01733 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms