Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
TNFP01375 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TNFP01375 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.76■□□□□ 0.27
TNFP01375 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.76■□□□□ 0.27
TNFP01375 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
TNFP01375 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
TNFP01375 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TNFP01375 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.76■□□□□ 0.27
TNFP01375 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.76■□□□□ 0.27
TNFP01375 FAM58CP-201ENST00000435741 640 ntBASIC16.76■□□□□ 0.27
TNFP01375 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.76■□□□□ 0.27
TNFP01375 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
TNFP01375 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.76■□□□□ 0.27
TNFP01375 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.76■□□□□ 0.27
TNFP01375 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.76■□□□□ 0.27
TNFP01375 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.76■□□□□ 0.27
TNFP01375 ACTL9-202ENST00000612068 1252 ntBASIC16.76■□□□□ 0.27
TNFP01375 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.76■□□□□ 0.27
TNFP01375 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.76■□□□□ 0.27
TNFP01375 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TNFP01375 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TNFP01375 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.76■□□□□ 0.27
TNFP01375 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TNFP01375 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TNFP01375 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
TNFP01375 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TNFP01375 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TNFP01375 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TNFP01375 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
TNFP01375 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TNFP01375 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TNFP01375 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.76■□□□□ 0.27
TNFP01375 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
TNFP01375 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TNFP01375 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TNFP01375 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TNFP01375 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.75■□□□□ 0.27
TNFP01375 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TNFP01375 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
TNFP01375 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TNFP01375 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TNFP01375 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TNFP01375 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.75■□□□□ 0.27
TNFP01375 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.75■□□□□ 0.27
TNFP01375 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TNFP01375 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
TNFP01375 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TNFP01375 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TNFP01375 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.75■□□□□ 0.27
TNFP01375 AC254562.1-201ENST00000417586 456 ntBASIC16.75■□□□□ 0.27
TNFP01375 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.75■□□□□ 0.27
TNFP01375 ACTG1P14-201ENST00000446382 1122 ntBASIC16.75■□□□□ 0.27
TNFP01375 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TNFP01375 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.75■□□□□ 0.27
TNFP01375 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.75■□□□□ 0.27
TNFP01375 AC068137.2-201ENST00000605408 478 ntBASIC16.75■□□□□ 0.27
TNFP01375 AC134043.2-201ENST00000624206 2238 ntBASIC16.75■□□□□ 0.27
TNFP01375 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TNFP01375 GNAS-203ENST00000306120 1878 ntBASIC16.75■□□□□ 0.27
TNFP01375 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TNFP01375 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.75■□□□□ 0.27
TNFP01375 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.75■□□□□ 0.27
TNFP01375 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TNFP01375 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
TNFP01375 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
TNFP01375 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TNFP01375 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
TNFP01375 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TNFP01375 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
TNFP01375 RNF165-205ENST00000588679 2904 ntBASIC16.74■□□□□ 0.27
TNFP01375 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
TNFP01375 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TNFP01375 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TNFP01375 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TNFP01375 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
TNFP01375 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TNFP01375 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TNFP01375 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.74■□□□□ 0.27
TNFP01375 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.74■□□□□ 0.27
TNFP01375 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.74■□□□□ 0.27
TNFP01375 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TNFP01375 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.74■□□□□ 0.27
TNFP01375 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.74■□□□□ 0.27
TNFP01375 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TNFP01375 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
TNFP01375 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.74■□□□□ 0.27
TNFP01375 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
TNFP01375 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC16.74■□□□□ 0.27
TNFP01375 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TNFP01375 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TNFP01375 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TNFP01375 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.73■□□□□ 0.27
TNFP01375 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TNFP01375 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TNFP01375 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
TNFP01375 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.73■□□□□ 0.27
TNFP01375 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.73■□□□□ 0.27
TNFP01375 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
TNFP01375 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TNFP01375 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms