Protein–RNA interactions for Protein: O95503

CBX6, Chromobox protein homolog 6, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6O95503 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.23■□□□□ 0.35
CBX6O95503 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
CBX6O95503 PAUPAR-201ENST00000630360 2965 ntBASIC17.23■□□□□ 0.35
CBX6O95503 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC17.23■□□□□ 0.35
CBX6O95503 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.23■□□□□ 0.35
CBX6O95503 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
CBX6O95503 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CBX6O95503 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CBX6O95503 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CBX6O95503 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CBX6O95503 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.23■□□□□ 0.35
CBX6O95503 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.23■□□□□ 0.35
CBX6O95503 AC092068.3-201ENST00000587894 2016 ntBASIC17.23■□□□□ 0.35
CBX6O95503 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.23■□□□□ 0.35
CBX6O95503 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CBX6O95503 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CBX6O95503 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CBX6O95503 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CBX6O95503 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.22■□□□□ 0.35
CBX6O95503 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CBX6O95503 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
CBX6O95503 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.22■□□□□ 0.35
CBX6O95503 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CBX6O95503 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CBX6O95503 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CBX6O95503 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CBX6O95503 AC046185.3-201ENST00000623228 1824 ntBASIC17.22■□□□□ 0.35
CBX6O95503 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CBX6O95503 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CBX6O95503 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CBX6O95503 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CBX6O95503 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.22■□□□□ 0.35
CBX6O95503 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CBX6O95503 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CBX6O95503 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
CBX6O95503 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.22■□□□□ 0.35
CBX6O95503 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CBX6O95503 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.22■□□□□ 0.35
CBX6O95503 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.22■□□□□ 0.35
CBX6O95503 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.22■□□□□ 0.35
CBX6O95503 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.22■□□□□ 0.35
CBX6O95503 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CBX6O95503 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.22■□□□□ 0.35
CBX6O95503 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CBX6O95503 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CBX6O95503 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CBX6O95503 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CBX6O95503 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CBX6O95503 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CBX6O95503 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CBX6O95503 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
CBX6O95503 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CBX6O95503 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CBX6O95503 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CBX6O95503 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CBX6O95503 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.21■□□□□ 0.35
CBX6O95503 AC078925.2-201ENST00000624013 1973 ntBASIC17.21■□□□□ 0.35
CBX6O95503 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CBX6O95503 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CBX6O95503 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CBX6O95503 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
CBX6O95503 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.21■□□□□ 0.35
CBX6O95503 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
CBX6O95503 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.21■□□□□ 0.35
CBX6O95503 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.21■□□□□ 0.35
CBX6O95503 MIR3652-201ENST00000579335 131 ntBASIC17.21■□□□□ 0.35
CBX6O95503 RN7SL510P-201ENST00000581311 263 ntBASIC17.21■□□□□ 0.35
CBX6O95503 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CBX6O95503 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CBX6O95503 AC092119.3-201ENST00000612618 583 ntBASIC17.21■□□□□ 0.35
CBX6O95503 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CBX6O95503 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CBX6O95503 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CBX6O95503 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CBX6O95503 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CBX6O95503 BANP-201ENST00000286122 2368 ntTSL 5 BASIC17.21■□□□□ 0.34
CBX6O95503 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
CBX6O95503 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.21■□□□□ 0.34
CBX6O95503 AC016396.2-201ENST00000562575 1417 ntBASIC17.21■□□□□ 0.34
CBX6O95503 HOXB1-202ENST00000577092 1414 ntBASIC17.21■□□□□ 0.34
CBX6O95503 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
CBX6O95503 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CBX6O95503 AC022898.2-201ENST00000616822 1312 ntBASIC17.21■□□□□ 0.34
CBX6O95503 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
CBX6O95503 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CBX6O95503 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.2■□□□□ 0.34
CBX6O95503 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC17.2■□□□□ 0.34
CBX6O95503 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC17.2■□□□□ 0.34
CBX6O95503 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CBX6O95503 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.2■□□□□ 0.34
CBX6O95503 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CBX6O95503 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CBX6O95503 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CBX6O95503 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CBX6O95503 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CBX6O95503 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CBX6O95503 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.2■□□□□ 0.34
CBX6O95503 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CBX6O95503 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CBX6O95503 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms