Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
VAPBO95292 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
VAPBO95292 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.33■□□□□ 0.36
VAPBO95292 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
VAPBO95292 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
VAPBO95292 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
VAPBO95292 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
VAPBO95292 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
VAPBO95292 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.33■□□□□ 0.36
VAPBO95292 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VAPBO95292 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VAPBO95292 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.33■□□□□ 0.36
VAPBO95292 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
VAPBO95292 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
VAPBO95292 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.33■□□□□ 0.36
VAPBO95292 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.33■□□□□ 0.36
VAPBO95292 AL118508.1-201ENST00000613502 2345 ntBASIC17.33■□□□□ 0.36
VAPBO95292 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.33■□□□□ 0.36
VAPBO95292 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VAPBO95292 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VAPBO95292 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
VAPBO95292 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
VAPBO95292 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VAPBO95292 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
VAPBO95292 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
VAPBO95292 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VAPBO95292 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
VAPBO95292 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VAPBO95292 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
VAPBO95292 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
VAPBO95292 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VAPBO95292 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.32■□□□□ 0.36
VAPBO95292 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
VAPBO95292 AC092068.3-201ENST00000587894 2016 ntBASIC17.32■□□□□ 0.36
VAPBO95292 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
VAPBO95292 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
VAPBO95292 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
VAPBO95292 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VAPBO95292 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.32■□□□□ 0.36
VAPBO95292 NUS1P2-201ENST00000417358 873 ntBASIC17.32■□□□□ 0.36
VAPBO95292 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
VAPBO95292 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
VAPBO95292 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.32■□□□□ 0.36
VAPBO95292 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.32■□□□□ 0.36
VAPBO95292 MIR5100-201ENST00000579544 119 ntBASIC17.32■□□□□ 0.36
VAPBO95292 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.32■□□□□ 0.36
VAPBO95292 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.32■□□□□ 0.36
VAPBO95292 AP000867.4-201ENST00000641616 219 ntBASIC17.32■□□□□ 0.36
VAPBO95292 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.32■□□□□ 0.36
VAPBO95292 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
VAPBO95292 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VAPBO95292 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.32■□□□□ 0.36
VAPBO95292 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
VAPBO95292 AC105020.1-201ENST00000435356 2205 ntBASIC17.32■□□□□ 0.36
VAPBO95292 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VAPBO95292 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VAPBO95292 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VAPBO95292 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VAPBO95292 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.31■□□□□ 0.36
VAPBO95292 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
VAPBO95292 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
VAPBO95292 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.31■□□□□ 0.36
VAPBO95292 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VAPBO95292 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
VAPBO95292 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VAPBO95292 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VAPBO95292 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
VAPBO95292 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VAPBO95292 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
VAPBO95292 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.31■□□□□ 0.36
VAPBO95292 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
VAPBO95292 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.31■□□□□ 0.36
VAPBO95292 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
VAPBO95292 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.31■□□□□ 0.36
VAPBO95292 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
VAPBO95292 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.31■□□□□ 0.36
VAPBO95292 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.31■□□□□ 0.36
VAPBO95292 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.31■□□□□ 0.36
VAPBO95292 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.31■□□□□ 0.36
VAPBO95292 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
VAPBO95292 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VAPBO95292 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
VAPBO95292 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
VAPBO95292 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
VAPBO95292 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
VAPBO95292 AC148477.5-201ENST00000625164 1645 ntBASIC17.31■□□□□ 0.36
VAPBO95292 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VAPBO95292 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.31■□□□□ 0.36
VAPBO95292 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
VAPBO95292 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
VAPBO95292 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.31■□□□□ 0.36
VAPBO95292 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
VAPBO95292 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VAPBO95292 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VAPBO95292 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
VAPBO95292 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
VAPBO95292 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
VAPBO95292 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VAPBO95292 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
VAPBO95292 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms