Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFPL1O75677 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.3■□□□□ 0.36
RFPL1O75677 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RFPL1O75677 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFPL1O75677 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
RFPL1O75677 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RFPL1O75677 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFPL1O75677 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFPL1O75677 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFPL1O75677 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.3■□□□□ 0.36
RFPL1O75677 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFPL1O75677 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFPL1O75677 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFPL1O75677 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.29■□□□□ 0.36
RFPL1O75677 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFPL1O75677 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
RFPL1O75677 AL049757.1-201ENST00000616842 1596 ntBASIC17.29■□□□□ 0.36
RFPL1O75677 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFPL1O75677 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.29■□□□□ 0.36
RFPL1O75677 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFPL1O75677 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFPL1O75677 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFPL1O75677 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFPL1O75677 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.29■□□□□ 0.36
RFPL1O75677 TSPY19P-201ENST00000418461 509 ntBASIC17.29■□□□□ 0.36
RFPL1O75677 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.29■□□□□ 0.36
RFPL1O75677 TSPY18P-201ENST00000441642 509 ntBASIC17.29■□□□□ 0.36
RFPL1O75677 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFPL1O75677 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RFPL1O75677 IGHV3-52-201ENST00000519770 353 ntBASIC17.29■□□□□ 0.36
RFPL1O75677 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RFPL1O75677 TPSP2-201ENST00000561760 610 ntBASIC17.29■□□□□ 0.36
RFPL1O75677 AC091304.2-201ENST00000564639 760 ntBASIC17.29■□□□□ 0.36
RFPL1O75677 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.29■□□□□ 0.36
RFPL1O75677 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.29■□□□□ 0.36
RFPL1O75677 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFPL1O75677 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RFPL1O75677 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
RFPL1O75677 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFPL1O75677 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.29■□□□□ 0.36
RFPL1O75677 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RFPL1O75677 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFPL1O75677 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
RFPL1O75677 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.29■□□□□ 0.36
RFPL1O75677 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RFPL1O75677 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
RFPL1O75677 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFPL1O75677 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.29■□□□□ 0.36
RFPL1O75677 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.29■□□□□ 0.36
RFPL1O75677 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.29■□□□□ 0.36
RFPL1O75677 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFPL1O75677 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFPL1O75677 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RFPL1O75677 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
RFPL1O75677 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFPL1O75677 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFPL1O75677 Z83836.1-201ENST00000624605 1642 ntBASIC17.29■□□□□ 0.36
RFPL1O75677 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFPL1O75677 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFPL1O75677 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFPL1O75677 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFPL1O75677 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RFPL1O75677 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RFPL1O75677 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.28■□□□□ 0.36
RFPL1O75677 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RFPL1O75677 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFPL1O75677 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFPL1O75677 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFPL1O75677 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.28■□□□□ 0.36
RFPL1O75677 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.28■□□□□ 0.36
RFPL1O75677 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.28■□□□□ 0.36
RFPL1O75677 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFPL1O75677 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.28■□□□□ 0.36
RFPL1O75677 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.28■□□□□ 0.36
RFPL1O75677 AC012615.1-201ENST00000565797 1299 ntBASIC17.28■□□□□ 0.36
RFPL1O75677 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.28■□□□□ 0.36
RFPL1O75677 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.28■□□□□ 0.36
RFPL1O75677 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.28■□□□□ 0.36
RFPL1O75677 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RFPL1O75677 AL732292.2-201ENST00000609649 430 ntBASIC17.28■□□□□ 0.36
RFPL1O75677 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
RFPL1O75677 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFPL1O75677 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.28■□□□□ 0.36
RFPL1O75677 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFPL1O75677 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFPL1O75677 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.28■□□□□ 0.36
RFPL1O75677 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFPL1O75677 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.28■□□□□ 0.36
RFPL1O75677 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
RFPL1O75677 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
RFPL1O75677 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RFPL1O75677 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.28■□□□□ 0.36
RFPL1O75677 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.28■□□□□ 0.36
RFPL1O75677 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
RFPL1O75677 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.27■□□□□ 0.36
RFPL1O75677 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RFPL1O75677 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RFPL1O75677 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RFPL1O75677 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.27■□□□□ 0.36
RFPL1O75677 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms