Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN11O75508 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CLDN11O75508 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN11O75508 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CLDN11O75508 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN11O75508 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.55■□□□□ 0.4
CLDN11O75508 LINC02012-201ENST00000608206 1725 ntBASIC17.55■□□□□ 0.4
CLDN11O75508 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CLDN11O75508 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN11O75508 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CLDN11O75508 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN11O75508 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN11O75508 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN11O75508 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.54■□□□□ 0.4
CLDN11O75508 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CLDN11O75508 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN11O75508 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN11O75508 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CLDN11O75508 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN11O75508 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN11O75508 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN11O75508 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN11O75508 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN11O75508 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CLDN11O75508 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.54■□□□□ 0.4
CLDN11O75508 MIR940-201ENST00000401276 94 ntBASIC17.54■□□□□ 0.4
CLDN11O75508 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.54■□□□□ 0.4
CLDN11O75508 AC007967.2-201ENST00000432613 625 ntBASIC17.54■□□□□ 0.4
CLDN11O75508 HCG4B-203ENST00000450128 991 ntBASIC17.54■□□□□ 0.4
CLDN11O75508 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.54■□□□□ 0.4
CLDN11O75508 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN11O75508 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN11O75508 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.54■□□□□ 0.4
CLDN11O75508 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN11O75508 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.54■□□□□ 0.4
CLDN11O75508 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
CLDN11O75508 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.54■□□□□ 0.4
CLDN11O75508 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CLDN11O75508 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN11O75508 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN11O75508 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN11O75508 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.54■□□□□ 0.4
CLDN11O75508 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN11O75508 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.54■□□□□ 0.4
CLDN11O75508 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN11O75508 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN11O75508 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN11O75508 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CLDN11O75508 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN11O75508 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.53■□□□□ 0.4
CLDN11O75508 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN11O75508 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN11O75508 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.53■□□□□ 0.4
CLDN11O75508 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN11O75508 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
CLDN11O75508 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN11O75508 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
CLDN11O75508 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.53■□□□□ 0.4
CLDN11O75508 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CLDN11O75508 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
CLDN11O75508 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CLDN11O75508 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CLDN11O75508 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
CLDN11O75508 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.53■□□□□ 0.4
CLDN11O75508 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.53■□□□□ 0.4
CLDN11O75508 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.53■□□□□ 0.4
CLDN11O75508 POLD2P1-201ENST00000511220 997 ntBASIC17.53■□□□□ 0.4
CLDN11O75508 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.53■□□□□ 0.4
CLDN11O75508 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.53■□□□□ 0.4
CLDN11O75508 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN11O75508 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN11O75508 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN11O75508 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN11O75508 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN11O75508 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CLDN11O75508 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.53■□□□□ 0.4
CLDN11O75508 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN11O75508 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN11O75508 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN11O75508 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN11O75508 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN11O75508 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLDN11O75508 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
CLDN11O75508 PMS2P7-201ENST00000506558 1336 ntBASIC17.52■□□□□ 0.4
CLDN11O75508 AC129492.6-201ENST00000611383 1305 ntBASIC17.52■□□□□ 0.4
CLDN11O75508 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CLDN11O75508 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLDN11O75508 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CLDN11O75508 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.52■□□□□ 0.4
CLDN11O75508 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLDN11O75508 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.4
CLDN11O75508 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.52■□□□□ 0.4
CLDN11O75508 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CLDN11O75508 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CLDN11O75508 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CLDN11O75508 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.52■□□□□ 0.4
CLDN11O75508 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.4
CLDN11O75508 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.52■□□□□ 0.4
CLDN11O75508 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.52■□□□□ 0.4
CLDN11O75508 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms