Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AGER-214ENST00000538695 487 ntTSL 2 BASIC7.58□□□□□ -1.2
USH2AO75445 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC7.58□□□□□ -1.2
USH2AO75445 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC7.58□□□□□ -1.2
USH2AO75445 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC7.58□□□□□ -1.2
USH2AO75445 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
USH2AO75445 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC7.58□□□□□ -1.2
USH2AO75445 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC7.58□□□□□ -1.2
USH2AO75445 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
USH2AO75445 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
USH2AO75445 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC7.58□□□□□ -1.2
USH2AO75445 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
USH2AO75445 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC7.58□□□□□ -1.2
USH2AO75445 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
USH2AO75445 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC7.57□□□□□ -1.2
USH2AO75445 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
USH2AO75445 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
USH2AO75445 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
USH2AO75445 IGF1-203ENST00000392904 761 ntTSL 5 BASIC7.57□□□□□ -1.2
USH2AO75445 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
USH2AO75445 AC007389.4-201ENST00000454674 793 ntBASIC7.57□□□□□ -1.2
USH2AO75445 AC016629.1-201ENST00000596579 586 ntBASIC7.57□□□□□ -1.2
USH2AO75445 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC7.57□□□□□ -1.2
USH2AO75445 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
USH2AO75445 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC7.57□□□□□ -1.2
USH2AO75445 PODN-203ENST00000395871 2744 ntTSL 5 BASIC7.57□□□□□ -1.2
USH2AO75445 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
USH2AO75445 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC7.57□□□□□ -1.2
USH2AO75445 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC7.57□□□□□ -1.2
USH2AO75445 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
USH2AO75445 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC7.57□□□□□ -1.2
USH2AO75445 APOC3-202ENST00000375345 604 ntTSL 5 BASIC7.57□□□□□ -1.2
USH2AO75445 KLF2P4-201ENST00000451959 1225 ntBASIC7.57□□□□□ -1.2
USH2AO75445 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC7.57□□□□□ -1.2
USH2AO75445 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC7.57□□□□□ -1.2
USH2AO75445 AL118558.3-201ENST00000607414 1079 ntBASIC7.57□□□□□ -1.2
USH2AO75445 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
USH2AO75445 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
USH2AO75445 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
USH2AO75445 PDIA3P1-201ENST00000471856 1510 ntBASIC7.57□□□□□ -1.2
USH2AO75445 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC7.57□□□□□ -1.2
USH2AO75445 GRAMD4P3-201ENST00000621665 1669 ntBASIC7.57□□□□□ -1.2
USH2AO75445 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
USH2AO75445 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
USH2AO75445 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC7.57□□□□□ -1.2
USH2AO75445 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC7.57□□□□□ -1.2
USH2AO75445 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
USH2AO75445 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
USH2AO75445 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
USH2AO75445 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
USH2AO75445 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC7.57□□□□□ -1.2
USH2AO75445 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC7.57□□□□□ -1.2
USH2AO75445 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC7.57□□□□□ -1.2
USH2AO75445 CETN4P-206ENST00000642099 2168 ntBASIC7.57□□□□□ -1.2
USH2AO75445 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC7.57□□□□□ -1.2
USH2AO75445 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
USH2AO75445 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
USH2AO75445 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
USH2AO75445 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
USH2AO75445 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC7.57□□□□□ -1.2
USH2AO75445 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
USH2AO75445 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC7.57□□□□□ -1.2
USH2AO75445 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
USH2AO75445 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC7.57□□□□□ -1.2
USH2AO75445 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
USH2AO75445 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
USH2AO75445 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC7.57□□□□□ -1.2
USH2AO75445 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
USH2AO75445 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
USH2AO75445 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
USH2AO75445 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC7.57□□□□□ -1.2
USH2AO75445 CLDN5-201ENST00000403084 2357 ntBASIC7.57□□□□□ -1.2
USH2AO75445 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
USH2AO75445 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC7.57□□□□□ -1.2
USH2AO75445 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC7.57□□□□□ -1.2
USH2AO75445 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC7.57□□□□□ -1.2
USH2AO75445 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC7.57□□□□□ -1.2
USH2AO75445 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC7.57□□□□□ -1.2
USH2AO75445 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
USH2AO75445 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
USH2AO75445 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
USH2AO75445 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC7.56□□□□□ -1.2
USH2AO75445 AC087163.2-201ENST00000457299 853 ntBASIC7.56□□□□□ -1.2
USH2AO75445 TMEM198B-204ENST00000484016 896 ntBASIC7.56□□□□□ -1.2
USH2AO75445 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC7.56□□□□□ -1.2
USH2AO75445 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC7.56□□□□□ -1.2
USH2AO75445 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC7.56□□□□□ -1.2
USH2AO75445 AL009183.1-201ENST00000603760 355 ntBASIC7.56□□□□□ -1.2
USH2AO75445 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
USH2AO75445 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
USH2AO75445 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
USH2AO75445 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
USH2AO75445 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
USH2AO75445 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
USH2AO75445 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC7.56□□□□□ -1.2
USH2AO75445 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
USH2AO75445 AC009949.1-201ENST00000623048 1830 ntBASIC7.56□□□□□ -1.2
USH2AO75445 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
USH2AO75445 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
USH2AO75445 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
USH2AO75445 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms