Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
GFRA3O60609 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
GFRA3O60609 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
GFRA3O60609 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.54■□□□□ 0.24
GFRA3O60609 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.54■□□□□ 0.24
GFRA3O60609 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
GFRA3O60609 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC16.54■□□□□ 0.24
GFRA3O60609 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.54■□□□□ 0.24
GFRA3O60609 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
GFRA3O60609 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.54■□□□□ 0.24
GFRA3O60609 IGHJ2P-201ENST00000454480 60 ntBASIC16.54■□□□□ 0.24
GFRA3O60609 LDHBP1-201ENST00000455730 1119 ntBASIC16.54■□□□□ 0.24
GFRA3O60609 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC16.54■□□□□ 0.24
GFRA3O60609 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.54■□□□□ 0.24
GFRA3O60609 AC123567.1-201ENST00000548294 1261 ntBASIC16.54■□□□□ 0.24
GFRA3O60609 AL021578.1-201ENST00000613646 709 ntBASIC16.54■□□□□ 0.24
GFRA3O60609 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
GFRA3O60609 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC16.54■□□□□ 0.24
GFRA3O60609 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.54■□□□□ 0.24
GFRA3O60609 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
GFRA3O60609 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
GFRA3O60609 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
GFRA3O60609 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
GFRA3O60609 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
GFRA3O60609 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC16.53■□□□□ 0.24
GFRA3O60609 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC16.53■□□□□ 0.24
GFRA3O60609 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
GFRA3O60609 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
GFRA3O60609 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GFRA3O60609 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
GFRA3O60609 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
GFRA3O60609 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
GFRA3O60609 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GFRA3O60609 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC16.53■□□□□ 0.24
GFRA3O60609 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
GFRA3O60609 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC16.53■□□□□ 0.24
GFRA3O60609 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
GFRA3O60609 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GFRA3O60609 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC16.53■□□□□ 0.24
GFRA3O60609 AC253536.4-201ENST00000440539 267 ntBASIC16.53■□□□□ 0.24
GFRA3O60609 AC002558.1-201ENST00000488906 803 ntBASIC16.53■□□□□ 0.24
GFRA3O60609 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC16.53■□□□□ 0.24
GFRA3O60609 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC16.53■□□□□ 0.24
GFRA3O60609 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC16.53■□□□□ 0.24
GFRA3O60609 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC16.53■□□□□ 0.24
GFRA3O60609 BTNL10-201ENST00000595971 695 ntBASIC16.53■□□□□ 0.24
GFRA3O60609 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC16.53■□□□□ 0.24
GFRA3O60609 AL355338.1-201ENST00000612598 913 ntTSL 2 BASIC16.53■□□□□ 0.24
GFRA3O60609 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.53■□□□□ 0.24
GFRA3O60609 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC16.53■□□□□ 0.24
GFRA3O60609 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.53■□□□□ 0.24
GFRA3O60609 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GFRA3O60609 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
GFRA3O60609 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
GFRA3O60609 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GFRA3O60609 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GFRA3O60609 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC16.53■□□□□ 0.24
GFRA3O60609 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.53■□□□□ 0.24
GFRA3O60609 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.53■□□□□ 0.24
GFRA3O60609 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
GFRA3O60609 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
GFRA3O60609 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
GFRA3O60609 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
GFRA3O60609 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
GFRA3O60609 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.52■□□□□ 0.24
GFRA3O60609 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC16.52■□□□□ 0.24
GFRA3O60609 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
GFRA3O60609 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
GFRA3O60609 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
GFRA3O60609 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
GFRA3O60609 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
GFRA3O60609 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
GFRA3O60609 AC099336.1-201ENST00000417053 1171 ntBASIC16.52■□□□□ 0.24
GFRA3O60609 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.52■□□□□ 0.24
GFRA3O60609 MEP1AP4-201ENST00000423244 1087 ntBASIC16.52■□□□□ 0.24
GFRA3O60609 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
GFRA3O60609 IL12A-202ENST00000466512 1283 ntTSL 3 BASIC16.52■□□□□ 0.24
GFRA3O60609 FADS2-212ENST00000522639 360 ntTSL 5 BASIC16.52■□□□□ 0.24
GFRA3O60609 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC16.52■□□□□ 0.24
GFRA3O60609 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
GFRA3O60609 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.52■□□□□ 0.24
GFRA3O60609 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.52■□□□□ 0.24
GFRA3O60609 FADS2-215ENST00000574708 385 ntTSL 3 BASIC16.52■□□□□ 0.24
GFRA3O60609 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC16.52■□□□□ 0.24
GFRA3O60609 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.52■□□□□ 0.24
GFRA3O60609 AL118558.3-201ENST00000607414 1079 ntBASIC16.52■□□□□ 0.24
GFRA3O60609 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC16.52■□□□□ 0.24
GFRA3O60609 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC16.52■□□□□ 0.24
GFRA3O60609 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
GFRA3O60609 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
GFRA3O60609 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
GFRA3O60609 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
GFRA3O60609 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.52■□□□□ 0.23
GFRA3O60609 AC016027.1-202ENST00000607927 1699 ntBASIC16.52■□□□□ 0.23
GFRA3O60609 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
GFRA3O60609 ESPNP-201ENST00000270691 2015 ntBASIC16.52■□□□□ 0.23
GFRA3O60609 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
GFRA3O60609 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GFRA3O60609 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GFRA3O60609 PCDHAC2-203ENST00000615316 3011 ntBASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms