Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
IDH3BO43837 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
IDH3BO43837 IGHGP-201ENST00000390555 1178 ntBASIC15.89■□□□□ 0.13
IDH3BO43837 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
IDH3BO43837 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
IDH3BO43837 AL441883.1-201ENST00000566170 1045 ntBASIC15.89■□□□□ 0.13
IDH3BO43837 NAA38-203ENST00000575071 553 ntTSL 2 BASIC15.89■□□□□ 0.13
IDH3BO43837 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC15.89■□□□□ 0.13
IDH3BO43837 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
IDH3BO43837 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
IDH3BO43837 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
IDH3BO43837 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
IDH3BO43837 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
IDH3BO43837 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
IDH3BO43837 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC15.89■□□□□ 0.13
IDH3BO43837 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
IDH3BO43837 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
IDH3BO43837 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
IDH3BO43837 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
IDH3BO43837 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
IDH3BO43837 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
IDH3BO43837 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.89■□□□□ 0.13
IDH3BO43837 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
IDH3BO43837 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
IDH3BO43837 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC15.89■□□□□ 0.13
IDH3BO43837 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
IDH3BO43837 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
IDH3BO43837 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
IDH3BO43837 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
IDH3BO43837 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
IDH3BO43837 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
IDH3BO43837 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
IDH3BO43837 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
IDH3BO43837 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
IDH3BO43837 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
IDH3BO43837 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC15.88■□□□□ 0.13
IDH3BO43837 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
IDH3BO43837 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
IDH3BO43837 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.88■□□□□ 0.13
IDH3BO43837 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
IDH3BO43837 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
IDH3BO43837 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
IDH3BO43837 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
IDH3BO43837 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
IDH3BO43837 AP003733.1-201ENST00000491725 852 ntBASIC15.88■□□□□ 0.13
IDH3BO43837 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
IDH3BO43837 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC15.88■□□□□ 0.13
IDH3BO43837 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC15.88■□□□□ 0.13
IDH3BO43837 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC15.88■□□□□ 0.13
IDH3BO43837 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC15.88■□□□□ 0.13
IDH3BO43837 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
IDH3BO43837 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
IDH3BO43837 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
IDH3BO43837 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
IDH3BO43837 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC15.88■□□□□ 0.13
IDH3BO43837 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
IDH3BO43837 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
IDH3BO43837 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC15.88■□□□□ 0.13
IDH3BO43837 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
IDH3BO43837 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
IDH3BO43837 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
IDH3BO43837 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
IDH3BO43837 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC15.88■□□□□ 0.13
IDH3BO43837 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
IDH3BO43837 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
IDH3BO43837 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
IDH3BO43837 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.87■□□□□ 0.13
IDH3BO43837 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC15.87■□□□□ 0.13
IDH3BO43837 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
IDH3BO43837 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
IDH3BO43837 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC15.87■□□□□ 0.13
IDH3BO43837 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
IDH3BO43837 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
IDH3BO43837 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.87■□□□□ 0.13
IDH3BO43837 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.87■□□□□ 0.13
IDH3BO43837 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
IDH3BO43837 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
IDH3BO43837 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.87■□□□□ 0.13
IDH3BO43837 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
IDH3BO43837 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC15.87■□□□□ 0.13
IDH3BO43837 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
IDH3BO43837 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
IDH3BO43837 MIR662-201ENST00000384847 95 ntBASIC15.87■□□□□ 0.13
IDH3BO43837 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC15.87■□□□□ 0.13
IDH3BO43837 ZNF444P1-201ENST00000559497 298 ntBASIC15.87■□□□□ 0.13
IDH3BO43837 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC15.87■□□□□ 0.13
IDH3BO43837 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
IDH3BO43837 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
IDH3BO43837 AC011558.1-201ENST00000623459 338 ntBASIC15.87■□□□□ 0.13
IDH3BO43837 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC15.87■□□□□ 0.13
IDH3BO43837 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
IDH3BO43837 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
IDH3BO43837 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
IDH3BO43837 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC15.87■□□□□ 0.13
IDH3BO43837 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC15.87■□□□□ 0.13
IDH3BO43837 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
IDH3BO43837 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.87■□□□□ 0.13
IDH3BO43837 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.87■□□□□ 0.13
IDH3BO43837 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
IDH3BO43837 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms