Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
FOXN1O15353 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
FOXN1O15353 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
FOXN1O15353 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
FOXN1O15353 AC012317.2-201ENST00000623305 2251 ntBASIC20.51■□□□□ 0.87
FOXN1O15353 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
FOXN1O15353 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC20.51■□□□□ 0.87
FOXN1O15353 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC20.51■□□□□ 0.87
FOXN1O15353 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
FOXN1O15353 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
FOXN1O15353 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC20.51■□□□□ 0.87
FOXN1O15353 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC20.51■□□□□ 0.87
FOXN1O15353 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
FOXN1O15353 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
FOXN1O15353 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
FOXN1O15353 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
FOXN1O15353 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
FOXN1O15353 TREML5P-201ENST00000421694 576 ntBASIC20.51■□□□□ 0.87
FOXN1O15353 DDX43P3-201ENST00000441064 443 ntBASIC20.51■□□□□ 0.87
FOXN1O15353 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC20.51■□□□□ 0.87
FOXN1O15353 TIMM8BP1-201ENST00000452384 211 ntBASIC20.51■□□□□ 0.87
FOXN1O15353 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC20.51■□□□□ 0.87
FOXN1O15353 AC068137.2-201ENST00000605408 478 ntBASIC20.51■□□□□ 0.87
FOXN1O15353 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
FOXN1O15353 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
FOXN1O15353 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC20.51■□□□□ 0.87
FOXN1O15353 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
FOXN1O15353 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
FOXN1O15353 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
FOXN1O15353 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
FOXN1O15353 FLJ13224-201ENST00000313737 1514 ntBASIC20.51■□□□□ 0.87
FOXN1O15353 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
FOXN1O15353 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC20.51■□□□□ 0.87
FOXN1O15353 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
FOXN1O15353 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
FOXN1O15353 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC20.51■□□□□ 0.87
FOXN1O15353 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC20.51■□□□□ 0.87
FOXN1O15353 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC20.51■□□□□ 0.87
FOXN1O15353 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
FOXN1O15353 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
FOXN1O15353 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
FOXN1O15353 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
FOXN1O15353 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC20.5■□□□□ 0.87
FOXN1O15353 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
FOXN1O15353 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
FOXN1O15353 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
FOXN1O15353 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
FOXN1O15353 GATB-205ENST00000508611 605 ntTSL 2 BASIC20.5■□□□□ 0.87
FOXN1O15353 SERBP1P5-201ENST00000510079 1181 ntBASIC20.5■□□□□ 0.87
FOXN1O15353 IGHV3-42-201ENST00000520410 361 ntBASIC20.5■□□□□ 0.87
FOXN1O15353 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC20.5■□□□□ 0.87
FOXN1O15353 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
FOXN1O15353 GNE-204ENST00000539208 2190 ntTSL 2 BASIC20.5■□□□□ 0.87
FOXN1O15353 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
FOXN1O15353 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
FOXN1O15353 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
FOXN1O15353 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
FOXN1O15353 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC20.5■□□□□ 0.87
FOXN1O15353 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
FOXN1O15353 AL024508.2-201ENST00000607749 1894 ntBASIC20.5■□□□□ 0.87
FOXN1O15353 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC20.49■□□□□ 0.87
FOXN1O15353 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
FOXN1O15353 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
FOXN1O15353 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
FOXN1O15353 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
FOXN1O15353 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
FOXN1O15353 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC20.49■□□□□ 0.87
FOXN1O15353 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
FOXN1O15353 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
FOXN1O15353 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC20.49■□□□□ 0.87
FOXN1O15353 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
FOXN1O15353 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC20.49■□□□□ 0.87
FOXN1O15353 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC20.49■□□□□ 0.87
FOXN1O15353 AL512638.1-201ENST00000457493 794 ntBASIC20.49■□□□□ 0.87
FOXN1O15353 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
FOXN1O15353 RIN3-211ENST00000557762 517 ntTSL 3 BASIC20.49■□□□□ 0.87
FOXN1O15353 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC20.49■□□□□ 0.87
FOXN1O15353 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC20.49■□□□□ 0.87
FOXN1O15353 AC010336.2-201ENST00000564226 506 ntBASIC20.49■□□□□ 0.87
FOXN1O15353 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC20.49■□□□□ 0.87
FOXN1O15353 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC20.49■□□□□ 0.87
FOXN1O15353 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
FOXN1O15353 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC20.49■□□□□ 0.87
FOXN1O15353 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
FOXN1O15353 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC20.49■□□□□ 0.87
FOXN1O15353 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
FOXN1O15353 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
FOXN1O15353 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.49■□□□□ 0.87
FOXN1O15353 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
FOXN1O15353 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
FOXN1O15353 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC20.49■□□□□ 0.87
FOXN1O15353 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
FOXN1O15353 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
FOXN1O15353 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
FOXN1O15353 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
FOXN1O15353 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC20.49■□□□□ 0.87
FOXN1O15353 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
FOXN1O15353 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
FOXN1O15353 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
FOXN1O15353 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms