Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SOX1O00570 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC18.13■□□□□ 0.49
SOX1O00570 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SOX1O00570 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC18.13■□□□□ 0.49
SOX1O00570 MYCLP2-201ENST00000449268 967 ntBASIC18.13■□□□□ 0.49
SOX1O00570 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SOX1O00570 ZNF767P-206ENST00000513792 565 ntBASIC18.13■□□□□ 0.49
SOX1O00570 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC18.13■□□□□ 0.49
SOX1O00570 AL589739.1-201ENST00000607720 493 ntBASIC18.13■□□□□ 0.49
SOX1O00570 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC18.13■□□□□ 0.49
SOX1O00570 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.13■□□□□ 0.49
SOX1O00570 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SOX1O00570 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
SOX1O00570 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SOX1O00570 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SOX1O00570 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
SOX1O00570 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SOX1O00570 CETN4P-206ENST00000642099 2168 ntBASIC18.13■□□□□ 0.49
SOX1O00570 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SOX1O00570 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SOX1O00570 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SOX1O00570 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.12■□□□□ 0.49
SOX1O00570 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SOX1O00570 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.12■□□□□ 0.49
SOX1O00570 NARF-206ENST00000457415 1668 ntTSL 5 BASIC18.12■□□□□ 0.49
SOX1O00570 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SOX1O00570 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SOX1O00570 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SOX1O00570 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
SOX1O00570 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SOX1O00570 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SOX1O00570 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SOX1O00570 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC18.12■□□□□ 0.49
SOX1O00570 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SOX1O00570 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC18.12■□□□□ 0.49
SOX1O00570 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC18.12■□□□□ 0.49
SOX1O00570 AGER-214ENST00000538695 487 ntTSL 2 BASIC18.12■□□□□ 0.49
SOX1O00570 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SOX1O00570 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.12■□□□□ 0.49
SOX1O00570 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SOX1O00570 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SOX1O00570 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.12■□□□□ 0.49
SOX1O00570 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SOX1O00570 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.12■□□□□ 0.49
SOX1O00570 BTBD7P1-201ENST00000447253 1453 ntBASIC18.12■□□□□ 0.49
SOX1O00570 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SOX1O00570 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.12■□□□□ 0.49
SOX1O00570 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SOX1O00570 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.12■□□□□ 0.49
SOX1O00570 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
SOX1O00570 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
SOX1O00570 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
SOX1O00570 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC18.11■□□□□ 0.49
SOX1O00570 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SOX1O00570 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SOX1O00570 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC18.11■□□□□ 0.49
SOX1O00570 MTND6P24-201ENST00000440466 518 ntBASIC18.11■□□□□ 0.49
SOX1O00570 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SOX1O00570 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
SOX1O00570 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC18.11■□□□□ 0.49
SOX1O00570 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC18.11■□□□□ 0.49
SOX1O00570 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
SOX1O00570 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC18.11■□□□□ 0.49
SOX1O00570 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC18.11■□□□□ 0.49
SOX1O00570 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC18.11■□□□□ 0.49
SOX1O00570 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC18.11■□□□□ 0.49
SOX1O00570 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
SOX1O00570 BX276092.7-203ENST00000637198 1536 ntBASIC18.11■□□□□ 0.49
SOX1O00570 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SOX1O00570 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SOX1O00570 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SOX1O00570 AC016027.1-202ENST00000607927 1699 ntBASIC18.11■□□□□ 0.49
SOX1O00570 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SOX1O00570 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SOX1O00570 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
SOX1O00570 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SOX1O00570 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SOX1O00570 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SOX1O00570 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.11■□□□□ 0.49
SOX1O00570 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.11■□□□□ 0.49
SOX1O00570 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SOX1O00570 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SOX1O00570 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.1■□□□□ 0.49
SOX1O00570 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SOX1O00570 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SOX1O00570 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SOX1O00570 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SOX1O00570 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SOX1O00570 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC18.1■□□□□ 0.49
SOX1O00570 NSL1-201ENST00000366976 722 ntTSL 2 BASIC18.1■□□□□ 0.49
SOX1O00570 MIR1247-201ENST00000408206 136 ntBASIC18.1■□□□□ 0.49
SOX1O00570 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SOX1O00570 AC002558.1-201ENST00000488906 803 ntBASIC18.1■□□□□ 0.49
SOX1O00570 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC18.1■□□□□ 0.49
SOX1O00570 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC18.1■□□□□ 0.49
SOX1O00570 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC18.1■□□□□ 0.49
SOX1O00570 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SOX1O00570 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SOX1O00570 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.1■□□□□ 0.49
SOX1O00570 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms