Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SLC28A1O00337 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC28A1O00337 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
SLC28A1O00337 Z69720.1-201ENST00000601483 472 ntBASIC16.6■□□□□ 0.25
SLC28A1O00337 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.6■□□□□ 0.25
SLC28A1O00337 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.6■□□□□ 0.25
SLC28A1O00337 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC28A1O00337 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SLC28A1O00337 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
SLC28A1O00337 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC28A1O00337 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC28A1O00337 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SLC28A1O00337 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC28A1O00337 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SLC28A1O00337 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SLC28A1O00337 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SLC28A1O00337 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
SLC28A1O00337 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC28A1O00337 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC28A1O00337 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC28A1O00337 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SLC28A1O00337 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
SLC28A1O00337 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC28A1O00337 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.59■□□□□ 0.25
SLC28A1O00337 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC28A1O00337 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SLC28A1O00337 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.59■□□□□ 0.25
SLC28A1O00337 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SLC28A1O00337 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SLC28A1O00337 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SLC28A1O00337 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC28A1O00337 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC28A1O00337 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC28A1O00337 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC28A1O00337 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
SLC28A1O00337 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC28A1O00337 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.59■□□□□ 0.25
SLC28A1O00337 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.59■□□□□ 0.25
SLC28A1O00337 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC28A1O00337 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC28A1O00337 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC28A1O00337 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC28A1O00337 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SLC28A1O00337 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.59■□□□□ 0.25
SLC28A1O00337 FAM86EP-206ENST00000510506 987 ntBASIC16.59■□□□□ 0.25
SLC28A1O00337 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.59■□□□□ 0.25
SLC28A1O00337 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.59■□□□□ 0.25
SLC28A1O00337 AP005901.3-202ENST00000581653 237 ntBASIC16.59■□□□□ 0.25
SLC28A1O00337 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC28A1O00337 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.59■□□□□ 0.25
SLC28A1O00337 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.59■□□□□ 0.25
SLC28A1O00337 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SLC28A1O00337 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC28A1O00337 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.59■□□□□ 0.25
SLC28A1O00337 KRT18P1-202ENST00000452408 1331 ntBASIC16.59■□□□□ 0.25
SLC28A1O00337 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC28A1O00337 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
SLC28A1O00337 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC28A1O00337 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.59■□□□□ 0.25
SLC28A1O00337 AC233702.3-201ENST00000578656 1387 ntBASIC16.59■□□□□ 0.25
SLC28A1O00337 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC28A1O00337 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC28A1O00337 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SLC28A1O00337 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
SLC28A1O00337 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.59■□□□□ 0.25
SLC28A1O00337 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SLC28A1O00337 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SLC28A1O00337 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC28A1O00337 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
SLC28A1O00337 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.58■□□□□ 0.25
SLC28A1O00337 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
SLC28A1O00337 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
SLC28A1O00337 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
SLC28A1O00337 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SLC28A1O00337 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SLC28A1O00337 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
SLC28A1O00337 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
SLC28A1O00337 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
SLC28A1O00337 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.58■□□□□ 0.25
SLC28A1O00337 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC28A1O00337 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
SLC28A1O00337 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
SLC28A1O00337 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
SLC28A1O00337 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC28A1O00337 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.58■□□□□ 0.24
SLC28A1O00337 TSSC2-201ENST00000450217 709 ntBASIC16.58■□□□□ 0.24
SLC28A1O00337 MINOS1P3-201ENST00000457048 203 ntBASIC16.58■□□□□ 0.24
SLC28A1O00337 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC28A1O00337 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
SLC28A1O00337 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.58■□□□□ 0.24
SLC28A1O00337 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
SLC28A1O00337 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.58■□□□□ 0.24
SLC28A1O00337 FRMD8P1-201ENST00000440433 1524 ntBASIC16.58■□□□□ 0.24
SLC28A1O00337 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.58■□□□□ 0.24
SLC28A1O00337 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
SLC28A1O00337 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SLC28A1O00337 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
SLC28A1O00337 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.58■□□□□ 0.24
SLC28A1O00337 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
SLC28A1O00337 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms