Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.35■□□□□ 0.21
UPK1AO00322 AC111152.3-201ENST00000569699 673 ntBASIC16.35■□□□□ 0.21
UPK1AO00322 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.35■□□□□ 0.21
UPK1AO00322 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
UPK1AO00322 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.35■□□□□ 0.21
UPK1AO00322 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
UPK1AO00322 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
UPK1AO00322 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
UPK1AO00322 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
UPK1AO00322 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
UPK1AO00322 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
UPK1AO00322 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.35■□□□□ 0.21
UPK1AO00322 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.35■□□□□ 0.21
UPK1AO00322 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
UPK1AO00322 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
UPK1AO00322 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
UPK1AO00322 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
UPK1AO00322 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.35■□□□□ 0.21
UPK1AO00322 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.35■□□□□ 0.21
UPK1AO00322 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.35■□□□□ 0.21
UPK1AO00322 AC092053.1-201ENST00000605787 1936 ntBASIC16.35■□□□□ 0.21
UPK1AO00322 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
UPK1AO00322 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.35■□□□□ 0.21
UPK1AO00322 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.35■□□□□ 0.21
UPK1AO00322 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
UPK1AO00322 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.35■□□□□ 0.21
UPK1AO00322 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
UPK1AO00322 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.34■□□□□ 0.21
UPK1AO00322 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UPK1AO00322 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
UPK1AO00322 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UPK1AO00322 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UPK1AO00322 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
UPK1AO00322 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UPK1AO00322 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UPK1AO00322 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UPK1AO00322 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.34■□□□□ 0.21
UPK1AO00322 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.34■□□□□ 0.21
UPK1AO00322 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
UPK1AO00322 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UPK1AO00322 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
UPK1AO00322 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UPK1AO00322 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.34■□□□□ 0.21
UPK1AO00322 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
UPK1AO00322 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UPK1AO00322 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UPK1AO00322 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UPK1AO00322 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UPK1AO00322 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
UPK1AO00322 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.34■□□□□ 0.21
UPK1AO00322 POM121L3P-201ENST00000419331 1163 ntBASIC16.34■□□□□ 0.21
UPK1AO00322 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UPK1AO00322 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
UPK1AO00322 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.34■□□□□ 0.21
UPK1AO00322 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.34■□□□□ 0.21
UPK1AO00322 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
UPK1AO00322 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.34■□□□□ 0.21
UPK1AO00322 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.34■□□□□ 0.21
UPK1AO00322 AC008741.2-201ENST00000612792 3115 ntBASIC16.34■□□□□ 0.21
UPK1AO00322 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UPK1AO00322 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UPK1AO00322 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UPK1AO00322 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UPK1AO00322 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
UPK1AO00322 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.34■□□□□ 0.21
UPK1AO00322 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
UPK1AO00322 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UPK1AO00322 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UPK1AO00322 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.33■□□□□ 0.21
UPK1AO00322 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
UPK1AO00322 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
UPK1AO00322 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
UPK1AO00322 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
UPK1AO00322 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
UPK1AO00322 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
UPK1AO00322 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
UPK1AO00322 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
UPK1AO00322 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
UPK1AO00322 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
UPK1AO00322 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
UPK1AO00322 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.33■□□□□ 0.2
UPK1AO00322 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.33■□□□□ 0.2
UPK1AO00322 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
UPK1AO00322 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
UPK1AO00322 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
UPK1AO00322 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
UPK1AO00322 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
UPK1AO00322 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
UPK1AO00322 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
UPK1AO00322 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.33■□□□□ 0.2
UPK1AO00322 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.33■□□□□ 0.2
UPK1AO00322 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.33■□□□□ 0.2
UPK1AO00322 STK25P1-201ENST00000585406 838 ntBASIC16.33■□□□□ 0.2
UPK1AO00322 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.33■□□□□ 0.2
UPK1AO00322 AC114341.1-201ENST00000618070 349 ntBASIC16.33■□□□□ 0.2
UPK1AO00322 AD001527.2-201ENST00000622994 785 ntBASIC16.33■□□□□ 0.2
UPK1AO00322 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
UPK1AO00322 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
UPK1AO00322 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
UPK1AO00322 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms