Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CFAP99D6REC4 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CFAP99D6REC4 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CFAP99D6REC4 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CFAP99D6REC4 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.21■□□□□ 0.35
CFAP99D6REC4 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CFAP99D6REC4 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CFAP99D6REC4 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CFAP99D6REC4 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CFAP99D6REC4 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.21■□□□□ 0.35
CFAP99D6REC4 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.21■□□□□ 0.35
CFAP99D6REC4 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CFAP99D6REC4 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.21■□□□□ 0.35
CFAP99D6REC4 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CFAP99D6REC4 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.21■□□□□ 0.35
CFAP99D6REC4 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
CFAP99D6REC4 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.21■□□□□ 0.35
CFAP99D6REC4 FAAHP1-202ENST00000446499 1238 ntBASIC17.21■□□□□ 0.35
CFAP99D6REC4 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.21■□□□□ 0.35
CFAP99D6REC4 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CFAP99D6REC4 UNC93B7-201ENST00000509439 705 ntBASIC17.21■□□□□ 0.35
CFAP99D6REC4 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CFAP99D6REC4 AL022326.1-202ENST00000641533 845 ntBASIC17.21■□□□□ 0.35
CFAP99D6REC4 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CFAP99D6REC4 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CFAP99D6REC4 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CFAP99D6REC4 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CFAP99D6REC4 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
CFAP99D6REC4 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CFAP99D6REC4 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CFAP99D6REC4 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.21■□□□□ 0.34
CFAP99D6REC4 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
CFAP99D6REC4 FER1L4-210ENST00000615531 5998 ntBASIC17.21■□□□□ 0.34
CFAP99D6REC4 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.21■□□□□ 0.34
CFAP99D6REC4 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CFAP99D6REC4 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CFAP99D6REC4 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CFAP99D6REC4 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CFAP99D6REC4 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.2■□□□□ 0.34
CFAP99D6REC4 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
CFAP99D6REC4 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.2■□□□□ 0.34
CFAP99D6REC4 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CFAP99D6REC4 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CFAP99D6REC4 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CFAP99D6REC4 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CFAP99D6REC4 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CFAP99D6REC4 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.2■□□□□ 0.34
CFAP99D6REC4 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.2■□□□□ 0.34
CFAP99D6REC4 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CFAP99D6REC4 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.2■□□□□ 0.34
CFAP99D6REC4 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CFAP99D6REC4 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CFAP99D6REC4 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CFAP99D6REC4 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CFAP99D6REC4 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.2■□□□□ 0.34
CFAP99D6REC4 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CFAP99D6REC4 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
CFAP99D6REC4 FGFR3P6-201ENST00000457012 610 ntBASIC17.2■□□□□ 0.34
CFAP99D6REC4 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.2■□□□□ 0.34
CFAP99D6REC4 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CFAP99D6REC4 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.2■□□□□ 0.34
CFAP99D6REC4 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.2■□□□□ 0.34
CFAP99D6REC4 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.2■□□□□ 0.34
CFAP99D6REC4 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.2■□□□□ 0.34
CFAP99D6REC4 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.2■□□□□ 0.34
CFAP99D6REC4 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CFAP99D6REC4 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.2■□□□□ 0.34
CFAP99D6REC4 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CFAP99D6REC4 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CFAP99D6REC4 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CFAP99D6REC4 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CFAP99D6REC4 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CFAP99D6REC4 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CFAP99D6REC4 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CFAP99D6REC4 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
CFAP99D6REC4 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CFAP99D6REC4 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CFAP99D6REC4 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
CFAP99D6REC4 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CFAP99D6REC4 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.2■□□□□ 0.34
CFAP99D6REC4 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
CFAP99D6REC4 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CFAP99D6REC4 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CFAP99D6REC4 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.19■□□□□ 0.34
CFAP99D6REC4 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CFAP99D6REC4 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.19■□□□□ 0.34
CFAP99D6REC4 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CFAP99D6REC4 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CFAP99D6REC4 AL023806.1-201ENST00000603994 1649 ntBASIC17.19■□□□□ 0.34
CFAP99D6REC4 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
CFAP99D6REC4 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CFAP99D6REC4 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CFAP99D6REC4 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.19■□□□□ 0.34
CFAP99D6REC4 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CFAP99D6REC4 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.19■□□□□ 0.34
CFAP99D6REC4 PRYP5-201ENST00000451909 266 ntBASIC17.19■□□□□ 0.34
CFAP99D6REC4 AF238378.1-201ENST00000526806 358 ntBASIC17.19■□□□□ 0.34
CFAP99D6REC4 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.19■□□□□ 0.34
CFAP99D6REC4 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.19■□□□□ 0.34
CFAP99D6REC4 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms