Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 AC243591.1-201ENST00000452967 1364 ntBASIC15.22■□□□□ 0.03
NPIPB4C9JG80 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.22■□□□□ 0.03
NPIPB4C9JG80 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPIPB4C9JG80 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPIPB4C9JG80 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.22■□□□□ 0.03
NPIPB4C9JG80 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
NPIPB4C9JG80 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
NPIPB4C9JG80 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
NPIPB4C9JG80 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NPIPB4C9JG80 LINC00895-201ENST00000629028 1637 ntBASIC15.21■□□□□ 0.03
NPIPB4C9JG80 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.21■□□□□ 0.03
NPIPB4C9JG80 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
NPIPB4C9JG80 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
NPIPB4C9JG80 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NPIPB4C9JG80 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
NPIPB4C9JG80 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.21■□□□□ 0.03
NPIPB4C9JG80 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NPIPB4C9JG80 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NPIPB4C9JG80 DFFB-203ENST00000341385 572 ntTSL 5 BASIC15.21■□□□□ 0.03
NPIPB4C9JG80 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.21■□□□□ 0.03
NPIPB4C9JG80 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.21■□□□□ 0.03
NPIPB4C9JG80 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.21■□□□□ 0.03
NPIPB4C9JG80 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.21■□□□□ 0.03
NPIPB4C9JG80 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.21■□□□□ 0.03
NPIPB4C9JG80 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NPIPB4C9JG80 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC15.21■□□□□ 0.03
NPIPB4C9JG80 IRF8-202ENST00000562492 946 ntTSL 3 BASIC15.21■□□□□ 0.03
NPIPB4C9JG80 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.21■□□□□ 0.03
NPIPB4C9JG80 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.21■□□□□ 0.03
NPIPB4C9JG80 AC078925.2-201ENST00000624013 1973 ntBASIC15.21■□□□□ 0.03
NPIPB4C9JG80 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.03
NPIPB4C9JG80 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.03
NPIPB4C9JG80 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
NPIPB4C9JG80 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
NPIPB4C9JG80 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
NPIPB4C9JG80 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NPIPB4C9JG80 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.2■□□□□ 0.02
NPIPB4C9JG80 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
NPIPB4C9JG80 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
NPIPB4C9JG80 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NPIPB4C9JG80 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
NPIPB4C9JG80 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
NPIPB4C9JG80 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.2■□□□□ 0.02
NPIPB4C9JG80 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NPIPB4C9JG80 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NPIPB4C9JG80 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.2■□□□□ 0.02
NPIPB4C9JG80 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC15.2■□□□□ 0.02
NPIPB4C9JG80 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NPIPB4C9JG80 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
NPIPB4C9JG80 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.2■□□□□ 0.02
NPIPB4C9JG80 KRT8P49-201ENST00000604166 1432 ntBASIC15.2■□□□□ 0.02
NPIPB4C9JG80 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.2■□□□□ 0.02
NPIPB4C9JG80 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NPIPB4C9JG80 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NPIPB4C9JG80 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC15.2■□□□□ 0.02
NPIPB4C9JG80 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NPIPB4C9JG80 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NPIPB4C9JG80 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NPIPB4C9JG80 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.2■□□□□ 0.02
NPIPB4C9JG80 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NPIPB4C9JG80 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC15.2■□□□□ 0.02
NPIPB4C9JG80 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
NPIPB4C9JG80 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.2■□□□□ 0.02
NPIPB4C9JG80 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.2■□□□□ 0.02
NPIPB4C9JG80 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NPIPB4C9JG80 SART3-203ENST00000546611 1184 ntBASIC15.2■□□□□ 0.02
NPIPB4C9JG80 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.2■□□□□ 0.02
NPIPB4C9JG80 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.2■□□□□ 0.02
NPIPB4C9JG80 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.2■□□□□ 0.02
NPIPB4C9JG80 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC15.2■□□□□ 0.02
NPIPB4C9JG80 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC15.2■□□□□ 0.02
NPIPB4C9JG80 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC15.2■□□□□ 0.02
NPIPB4C9JG80 AC004706.3-202ENST00000621574 984 ntBASIC15.2■□□□□ 0.02
NPIPB4C9JG80 AF228730.7-201ENST00000641842 219 ntBASIC15.2■□□□□ 0.02
NPIPB4C9JG80 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NPIPB4C9JG80 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NPIPB4C9JG80 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NPIPB4C9JG80 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.2■□□□□ 0.02
NPIPB4C9JG80 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NPIPB4C9JG80 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.2■□□□□ 0.02
NPIPB4C9JG80 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NPIPB4C9JG80 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
NPIPB4C9JG80 AC106820.2-201ENST00000563775 3264 ntBASIC15.19■□□□□ 0.02
NPIPB4C9JG80 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.19■□□□□ 0.02
NPIPB4C9JG80 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
NPIPB4C9JG80 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NPIPB4C9JG80 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NPIPB4C9JG80 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NPIPB4C9JG80 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NPIPB4C9JG80 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
NPIPB4C9JG80 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NPIPB4C9JG80 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NPIPB4C9JG80 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
NPIPB4C9JG80 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NPIPB4C9JG80 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.19■□□□□ 0.02
NPIPB4C9JG80 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.19■□□□□ 0.02
NPIPB4C9JG80 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NPIPB4C9JG80 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NPIPB4C9JG80 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
NPIPB4C9JG80 LAGE3P1-201ENST00000425356 484 ntBASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms